Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_22450 and OH686_22455 are separated by 21 nucleotides OH686_22455 and OH686_22460 are separated by 94 nucleotides OH686_22460 and OH686_22465 are separated by 98 nucleotides OH686_22465 and OH686_22470 are separated by 29 nucleotides
OH686_22450: OH686_22450 - putative membrane protein, at 4,563,073 to 4,563,825
_22450
OH686_22455: OH686_22455 - Transcriptional regulator, LysR family, at 4,563,847 to 4,564,701
_22455
OH686_22460: OH686_22460 - hypothetical protein, at 4,564,796 to 4,565,032
_22460
OH686_22465: OH686_22465 - hypothetical protein, at 4,565,131 to 4,565,589
_22465
OH686_22470: OH686_22470 - hypothetical protein, at 4,565,619 to 4,566,812
_22470
Position (kb) 4564
4565
4566 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4563.823 kb on + strand at 4563.824 kb on - strand at 4563.848 kb on + strand at 4563.849 kb on - strand at 4563.868 kb on + strand at 4563.868 kb on + strand at 4563.868 kb on + strand at 4563.868 kb on + strand at 4563.868 kb on + strand at 4563.868 kb on + strand at 4563.868 kb on + strand at 4563.868 kb on + strand at 4563.868 kb on + strand at 4563.868 kb on + strand at 4563.868 kb on + strand at 4563.868 kb on + strand at 4563.869 kb on - strand at 4563.869 kb on - strand at 4563.869 kb on - strand at 4563.869 kb on - strand at 4563.869 kb on - strand at 4563.869 kb on - strand at 4563.869 kb on - strand at 4563.869 kb on - strand at 4563.869 kb on - strand at 4564.068 kb on + strand, within OH686_22455 at 4564.068 kb on + strand, within OH686_22455 at 4564.068 kb on + strand, within OH686_22455 at 4564.068 kb on + strand, within OH686_22455 at 4564.069 kb on - strand, within OH686_22455 at 4564.069 kb on - strand, within OH686_22455 at 4564.070 kb on + strand, within OH686_22455 at 4564.070 kb on + strand, within OH686_22455 at 4564.070 kb on + strand, within OH686_22455 at 4564.071 kb on - strand, within OH686_22455 at 4564.071 kb on - strand, within OH686_22455 at 4564.225 kb on + strand, within OH686_22455 at 4564.225 kb on + strand, within OH686_22455 at 4564.225 kb on + strand, within OH686_22455 at 4564.225 kb on + strand, within OH686_22455 at 4564.225 kb on + strand, within OH686_22455 at 4564.225 kb on + strand, within OH686_22455 at 4564.226 kb on - strand, within OH686_22455 at 4564.226 kb on - strand, within OH686_22455 at 4564.226 kb on - strand, within OH686_22455 at 4564.226 kb on - strand, within OH686_22455 at 4564.226 kb on - strand, within OH686_22455 at 4564.226 kb on - strand, within OH686_22455 at 4564.385 kb on + strand, within OH686_22455 at 4564.385 kb on + strand, within OH686_22455 at 4564.385 kb on + strand, within OH686_22455 at 4564.385 kb on + strand, within OH686_22455 at 4564.385 kb on + strand, within OH686_22455 at 4564.385 kb on + strand, within OH686_22455 at 4564.385 kb on + strand, within OH686_22455 at 4564.385 kb on + strand, within OH686_22455 at 4564.386 kb on - strand, within OH686_22455 at 4564.386 kb on - strand, within OH686_22455 at 4564.386 kb on - strand, within OH686_22455 at 4564.386 kb on - strand, within OH686_22455 at 4564.386 kb on - strand, within OH686_22455 at 4564.386 kb on - strand, within OH686_22455 at 4564.386 kb on - strand, within OH686_22455 at 4564.386 kb on - strand, within OH686_22455 at 4564.481 kb on + strand, within OH686_22455 at 4564.817 kb on + strand at 4564.818 kb on - strand at 4564.933 kb on + strand, within OH686_22460 at 4564.934 kb on - strand, within OH686_22460 at 4565.038 kb on + strand at 4565.038 kb on + strand at 4565.038 kb on + strand at 4565.038 kb on + strand at 4565.038 kb on + strand at 4565.038 kb on + strand at 4565.039 kb on - strand at 4565.039 kb on - strand at 4565.039 kb on - strand at 4565.039 kb on - strand at 4565.039 kb on - strand at 4565.039 kb on - strand at 4565.114 kb on + strand at 4565.114 kb on + strand at 4565.114 kb on + strand at 4565.114 kb on + strand at 4565.114 kb on + strand at 4565.115 kb on - strand at 4565.115 kb on - strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.117 kb on + strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.118 kb on - strand at 4565.258 kb on - strand, within OH686_22465 at 4565.258 kb on - strand, within OH686_22465 at 4565.258 kb on - strand, within OH686_22465 at 4565.368 kb on + strand, within OH686_22465 at 4565.368 kb on + strand, within OH686_22465 at 4565.368 kb on + strand, within OH686_22465 at 4565.368 kb on + strand, within OH686_22465 at 4565.368 kb on + strand, within OH686_22465 at 4565.369 kb on - strand, within OH686_22465 at 4565.369 kb on - strand, within OH686_22465 at 4565.369 kb on - strand, within OH686_22465 at 4565.369 kb on - strand, within OH686_22465 at 4565.369 kb on - strand, within OH686_22465 at 4565.369 kb on - strand, within OH686_22465 at 4565.369 kb on - strand, within OH686_22465 at 4565.369 kb on - strand, within OH686_22465 at 4565.374 kb on + strand, within OH686_22465 at 4565.374 kb on + strand, within OH686_22465 at 4565.374 kb on + strand, within OH686_22465 at 4565.374 kb on + strand, within OH686_22465 at 4565.374 kb on + strand, within OH686_22465 at 4565.374 kb on + strand, within OH686_22465 at 4565.374 kb on + strand, within OH686_22465 at 4565.374 kb on + strand, within OH686_22465 at 4565.374 kb on + strand, within OH686_22465 at 4565.374 kb on + strand, within OH686_22465 at 4565.374 kb on + strand, within OH686_22465 at 4565.374 kb on + strand, within OH686_22465 at 4565.375 kb on - strand, within OH686_22465 at 4565.375 kb on - strand, within OH686_22465 at 4565.375 kb on - strand, within OH686_22465 at 4565.375 kb on - strand, within OH686_22465 at 4565.375 kb on - strand, within OH686_22465 at 4565.375 kb on - strand, within OH686_22465 at 4565.375 kb on - strand, within OH686_22465 at 4565.375 kb on - strand, within OH686_22465 at 4565.375 kb on - strand, within OH686_22465 at 4565.474 kb on + strand, within OH686_22465 at 4565.474 kb on + strand, within OH686_22465 at 4565.474 kb on + strand, within OH686_22465 at 4565.474 kb on + strand, within OH686_22465 at 4565.474 kb on + strand, within OH686_22465 at 4565.475 kb on - strand, within OH686_22465 at 4565.587 kb on + strand at 4565.587 kb on + strand at 4565.587 kb on + strand at 4565.587 kb on + strand at 4565.587 kb on + strand at 4565.587 kb on + strand at 4565.587 kb on + strand at 4565.587 kb on + strand at 4565.588 kb on - strand at 4565.588 kb on - strand at 4565.588 kb on - strand at 4565.607 kb on + strand at 4565.607 kb on + strand at 4565.607 kb on + strand at 4565.608 kb on - strand at 4565.608 kb on - strand at 4565.608 kb on - strand at 4565.608 kb on - strand at 4565.608 kb on - strand at 4565.608 kb on - strand at 4565.608 kb on - strand at 4565.784 kb on + strand, within OH686_22470 at 4565.784 kb on + strand, within OH686_22470 at 4565.784 kb on + strand, within OH686_22470 at 4565.784 kb on + strand, within OH686_22470 at 4565.785 kb on - strand, within OH686_22470 at 4565.814 kb on + strand, within OH686_22470 at 4565.815 kb on - strand, within OH686_22470 at 4565.877 kb on + strand, within OH686_22470 at 4565.878 kb on - strand, within OH686_22470 at 4565.878 kb on - strand, within OH686_22470 at 4565.967 kb on + strand, within OH686_22470 at 4565.967 kb on + strand, within OH686_22470 at 4565.967 kb on + strand, within OH686_22470 at 4565.967 kb on + strand, within OH686_22470 at 4565.967 kb on + strand, within OH686_22470 at 4565.967 kb on + strand, within OH686_22470 at 4565.967 kb on + strand, within OH686_22470 at 4565.967 kb on + strand, within OH686_22470 at 4565.967 kb on + strand, within OH686_22470 at 4565.968 kb on - strand, within OH686_22470
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,563,823 + +0.2 4,563,824 - +0.6 4,563,848 + -0.4 4,563,849 - +0.8 4,563,868 + +0.8 4,563,868 + -0.3 4,563,868 + -0.0 4,563,868 + +2.1 4,563,868 + +0.3 4,563,868 + -0.1 4,563,868 + -0.2 4,563,868 + -0.3 4,563,868 + +0.7 4,563,868 + +1.8 4,563,868 + -1.0 4,563,868 + -0.5 4,563,869 - +0.6 4,563,869 - +0.2 4,563,869 - -0.3 4,563,869 - +0.1 4,563,869 - -0.9 4,563,869 - -0.9 4,563,869 - -0.3 4,563,869 - -0.2 4,563,869 - -0.9 4,564,068 + OH686_22455 0.26 -1.4 4,564,068 + OH686_22455 0.26 -1.7 4,564,068 + OH686_22455 0.26 -0.1 4,564,068 + OH686_22455 0.26 -0.6 4,564,069 - OH686_22455 0.26 -0.2 4,564,069 - OH686_22455 0.26 +0.3 4,564,070 + OH686_22455 0.26 -0.4 4,564,070 + OH686_22455 0.26 +0.3 4,564,070 + OH686_22455 0.26 -0.3 4,564,071 - OH686_22455 0.26 -0.0 4,564,071 - OH686_22455 0.26 -0.7 4,564,225 + OH686_22455 0.44 -1.0 4,564,225 + OH686_22455 0.44 -0.2 4,564,225 + OH686_22455 0.44 +0.4 4,564,225 + OH686_22455 0.44 +0.5 4,564,225 + OH686_22455 0.44 +0.0 4,564,225 + OH686_22455 0.44 -0.8 4,564,226 - OH686_22455 0.44 -1.5 4,564,226 - OH686_22455 0.44 +0.2 4,564,226 - OH686_22455 0.44 -1.3 4,564,226 - OH686_22455 0.44 +0.1 4,564,226 - OH686_22455 0.44 -1.7 4,564,226 - OH686_22455 0.44 -1.1 4,564,385 + OH686_22455 0.63 -0.4 4,564,385 + OH686_22455 0.63 -0.1 4,564,385 + OH686_22455 0.63 +0.7 4,564,385 + OH686_22455 0.63 -0.2 4,564,385 + OH686_22455 0.63 +0.8 4,564,385 + OH686_22455 0.63 +1.0 4,564,385 + OH686_22455 0.63 -0.6 4,564,385 + OH686_22455 0.63 +0.6 4,564,386 - OH686_22455 0.63 +0.8 4,564,386 - OH686_22455 0.63 -0.6 4,564,386 - OH686_22455 0.63 +0.7 4,564,386 - OH686_22455 0.63 +0.3 4,564,386 - OH686_22455 0.63 +1.0 4,564,386 - OH686_22455 0.63 -1.0 4,564,386 - OH686_22455 0.63 -0.3 4,564,386 - OH686_22455 0.63 +0.3 4,564,481 + OH686_22455 0.74 -0.1 4,564,817 + -0.2 4,564,818 - +0.0 4,564,933 + OH686_22460 0.58 -0.9 4,564,934 - OH686_22460 0.58 -0.8 4,565,038 + -0.3 4,565,038 + -1.4 4,565,038 + -0.3 4,565,038 + +0.7 4,565,038 + -0.2 4,565,038 + -0.5 4,565,039 - +0.3 4,565,039 - -1.2 4,565,039 - -0.5 4,565,039 - +0.3 4,565,039 - +0.8 4,565,039 - +1.1 4,565,114 + +0.2 4,565,114 + +0.6 4,565,114 + -0.3 4,565,114 + -0.1 4,565,114 + -3.0 4,565,115 - +0.8 4,565,115 - +0.5 4,565,117 + -0.2 4,565,117 + +0.7 4,565,117 + -0.2 4,565,117 + +2.5 4,565,117 + -0.0 4,565,117 + +0.1 4,565,117 + -0.3 4,565,117 + -0.9 4,565,117 + +0.7 4,565,117 + +0.0 4,565,117 + -1.2 4,565,117 + +0.2 4,565,117 + -0.5 4,565,117 + -0.7 4,565,117 + -0.2 4,565,117 + +2.6 4,565,117 + -0.4 4,565,117 + +0.7 4,565,117 + -0.3 4,565,117 + -0.5 4,565,118 - -3.0 4,565,118 - +0.1 4,565,118 - +0.1 4,565,118 - -0.5 4,565,118 - +0.4 4,565,118 - +0.6 4,565,118 - -0.3 4,565,118 - +0.8 4,565,118 - -1.1 4,565,118 - -0.2 4,565,118 - +0.5 4,565,118 - +0.1 4,565,118 - +0.2 4,565,118 - -0.9 4,565,118 - -0.8 4,565,258 - OH686_22465 0.28 -0.1 4,565,258 - OH686_22465 0.28 -0.5 4,565,258 - OH686_22465 0.28 +0.4 4,565,368 + OH686_22465 0.52 +0.2 4,565,368 + OH686_22465 0.52 +1.4 4,565,368 + OH686_22465 0.52 +0.2 4,565,368 + OH686_22465 0.52 -0.3 4,565,368 + OH686_22465 0.52 +0.0 4,565,369 - OH686_22465 0.52 +0.0 4,565,369 - OH686_22465 0.52 +0.2 4,565,369 - OH686_22465 0.52 +0.8 4,565,369 - OH686_22465 0.52 +1.1 4,565,369 - OH686_22465 0.52 -0.4 4,565,369 - OH686_22465 0.52 +0.4 4,565,369 - OH686_22465 0.52 -0.1 4,565,369 - OH686_22465 0.52 +0.2 4,565,374 + OH686_22465 0.53 -0.6 4,565,374 + OH686_22465 0.53 -0.4 4,565,374 + OH686_22465 0.53 +0.1 4,565,374 + OH686_22465 0.53 +1.6 4,565,374 + OH686_22465 0.53 -0.8 4,565,374 + OH686_22465 0.53 -0.6 4,565,374 + OH686_22465 0.53 +0.4 4,565,374 + OH686_22465 0.53 +0.3 4,565,374 + OH686_22465 0.53 -0.1 4,565,374 + OH686_22465 0.53 +0.7 4,565,374 + OH686_22465 0.53 -0.8 4,565,374 + OH686_22465 0.53 +0.2 4,565,375 - OH686_22465 0.53 -0.0 4,565,375 - OH686_22465 0.53 +0.0 4,565,375 - OH686_22465 0.53 -0.2 4,565,375 - OH686_22465 0.53 -1.8 4,565,375 - OH686_22465 0.53 +0.7 4,565,375 - OH686_22465 0.53 +0.9 4,565,375 - OH686_22465 0.53 +0.4 4,565,375 - OH686_22465 0.53 -0.6 4,565,375 - OH686_22465 0.53 +0.3 4,565,474 + OH686_22465 0.75 -0.3 4,565,474 + OH686_22465 0.75 -0.1 4,565,474 + OH686_22465 0.75 -0.8 4,565,474 + OH686_22465 0.75 +0.5 4,565,474 + OH686_22465 0.75 -0.0 4,565,475 - OH686_22465 0.75 -0.3 4,565,587 + -1.3 4,565,587 + +0.5 4,565,587 + -0.1 4,565,587 + -0.6 4,565,587 + +0.3 4,565,587 + +0.3 4,565,587 + -0.6 4,565,587 + +0.3 4,565,588 - +0.7 4,565,588 - -0.6 4,565,588 - -0.9 4,565,607 + +0.7 4,565,607 + -1.9 4,565,607 + +0.5 4,565,608 - -0.1 4,565,608 - -1.7 4,565,608 - +0.1 4,565,608 - -0.1 4,565,608 - +1.8 4,565,608 - -0.4 4,565,608 - -0.8 4,565,784 + OH686_22470 0.14 +0.2 4,565,784 + OH686_22470 0.14 -1.3 4,565,784 + OH686_22470 0.14 -0.3 4,565,784 + OH686_22470 0.14 -0.2 4,565,785 - OH686_22470 0.14 -0.2 4,565,814 + OH686_22470 0.16 +1.8 4,565,815 - OH686_22470 0.16 -0.2 4,565,877 + OH686_22470 0.22 +0.3 4,565,878 - OH686_22470 0.22 +0.2 4,565,878 - OH686_22470 0.22 +0.5 4,565,967 + OH686_22470 0.29 +0.0 4,565,967 + OH686_22470 0.29 +0.5 4,565,967 + OH686_22470 0.29 -0.5 4,565,967 + OH686_22470 0.29 +0.6 4,565,967 + OH686_22470 0.29 -1.3 4,565,967 + OH686_22470 0.29 +0.2 4,565,967 + OH686_22470 0.29 -1.9 4,565,967 + OH686_22470 0.29 +0.3 4,565,967 + OH686_22470 0.29 -0.4 4,565,968 - OH686_22470 0.29 +1.2
Or see this region's nucleotide sequence