Strain Fitness in Pseudomonas sp. S08-1 around OH686_22005

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
4,483,259	-		OH686_22000	0.51	+0.1
4,483,462	+		OH686_22000	0.71	-0.1
4,483,471	+		OH686_22000	0.71	-0.9
4,483,471	+		OH686_22000	0.71	-1.1
4,483,471	+		OH686_22000	0.71	+0.1
4,483,472	-		OH686_22000	0.71	-0.2
4,483,472	-		OH686_22000	0.71	-1.0
4,483,472	-		OH686_22000	0.71	-0.7
4,483,472	-		OH686_22000	0.71	+0.5
4,483,503	+		OH686_22000	0.75	-0.7
4,483,503	+		OH686_22000	0.75	-0.2
4,483,504	-		OH686_22000	0.75	+0.2
4,483,636	+		OH686_22000	0.88	-0.9
4,483,669	-				-0.5
4,483,759	+				-1.0
4,483,759	+				-0.8
4,483,759	+				+1.1
4,483,759	+				-1.2
4,483,760	-				+0.3
4,483,760	-				+1.0
4,483,760	-				-0.9
4,483,797	+				+0.3
4,483,797	+				-0.8
4,483,798	-				-0.0
4,483,823	+				-1.1
4,483,920	+				+0.4
4,483,920	+				+0.2
4,483,920	+				-0.3
4,483,920	+				+0.0
4,483,920	+				-1.0
4,483,920	+				+0.3
4,483,921	-				-1.9
4,483,921	-				-0.8
4,483,921	-				-1.0
4,483,921	-				-3.1
4,483,921	-				-1.0
4,483,934	+				-1.6
4,483,934	+				-2.0
4,483,934	+				-2.8
4,483,934	+				-2.0
4,483,934	+				-1.0
4,483,935	-				-1.2
4,483,940	+				-1.9
4,483,940	+				-0.2
4,483,940	+				-3.0
4,483,941	-				-2.3
4,483,941	-				-2.6
4,484,044	-				-3.2
4,484,117	+		OH686_22005	0.14	-1.5
4,484,117	+		OH686_22005	0.14	+0.1
4,484,117	+		OH686_22005	0.14	-0.2
4,484,117	+		OH686_22005	0.14	-2.2
4,484,117	+		OH686_22005	0.14	-0.2
4,484,118	-		OH686_22005	0.14	-1.4
4,484,118	-		OH686_22005	0.14	-0.5
4,484,118	-		OH686_22005	0.14	+0.8
4,484,118	-		OH686_22005	0.14	-2.3
4,484,118	-		OH686_22005	0.14	-0.8
4,484,118	-		OH686_22005	0.14	-1.5
4,484,231	+		OH686_22005	0.22	-1.0
4,484,231	+		OH686_22005	0.22	-0.2
4,484,231	+		OH686_22005	0.22	-3.3
4,484,232	-		OH686_22005	0.22	-3.6
4,484,232	-		OH686_22005	0.22	-0.2
4,484,232	-		OH686_22005	0.22	-1.6
4,484,232	-		OH686_22005	0.22	-0.6
4,484,232	-		OH686_22005	0.22	-3.9
4,484,232	-		OH686_22005	0.22	-0.2
4,484,232	-		OH686_22005	0.22	-1.0
4,484,232	-		OH686_22005	0.22	-1.6
4,484,232	-		OH686_22005	0.22	-2.0
4,484,232	-		OH686_22005	0.22	-1.4
4,484,232	-		OH686_22005	0.22	-0.2
4,484,234	+		OH686_22005	0.22	-2.4
4,484,411	+		OH686_22005	0.35	-2.8
4,484,411	+		OH686_22005	0.35	-0.5
4,484,411	+		OH686_22005	0.35	-1.0
4,484,412	-		OH686_22005	0.35	-0.2
4,484,412	-		OH686_22005	0.35	-1.8
4,484,412	-		OH686_22005	0.35	-1.4
4,484,465	+		OH686_22005	0.39	-1.8
4,484,465	+		OH686_22005	0.39	-3.7
4,484,465	+		OH686_22005	0.39	-2.8
4,484,466	-		OH686_22005	0.39	-0.8
4,484,466	-		OH686_22005	0.39	-1.6
4,484,466	-		OH686_22005	0.39	-3.2
4,484,466	-		OH686_22005	0.39	-1.9
4,484,492	+		OH686_22005	0.41	-0.5
4,484,557	+		OH686_22005	0.45	-0.5
4,484,557	+		OH686_22005	0.45	-1.0
4,484,557	+		OH686_22005	0.45	-2.1
4,484,557	+		OH686_22005	0.45	-0.2
4,484,557	+		OH686_22005	0.45	-1.6
4,484,557	+		OH686_22005	0.45	-1.5
4,484,557	+		OH686_22005	0.45	-2.5
4,484,558	-		OH686_22005	0.45	-1.2
4,484,558	-		OH686_22005	0.45	-0.2
4,484,558	-		OH686_22005	0.45	-2.4
4,484,558	-		OH686_22005	0.45	-3.1
4,484,558	-		OH686_22005	0.45	-0.2
4,484,558	-		OH686_22005	0.45	-0.5
4,484,558	-		OH686_22005	0.45	-3.0
4,484,558	-		OH686_22005	0.45	-2.6
4,484,558	-		OH686_22005	0.45	-2.3
4,484,558	-		OH686_22005	0.45	-0.5
4,484,558	-		OH686_22005	0.45	-2.4
4,484,558	-		OH686_22005	0.45	-3.0
4,484,558	-		OH686_22005	0.45	-1.8
4,484,594	+		OH686_22005	0.48	-2.8
4,484,594	+		OH686_22005	0.48	-1.9
4,484,594	+		OH686_22005	0.48	-0.5
4,484,595	-		OH686_22005	0.48	-2.3
4,484,595	-		OH686_22005	0.48	-3.5
4,484,611	+		OH686_22005	0.49	-2.6
4,484,612	-		OH686_22005	0.49	-2.4
4,484,639	+		OH686_22005	0.51	-1.6
4,484,639	+		OH686_22005	0.51	-0.2
4,484,639	+		OH686_22005	0.51	-1.3
4,484,816	+		OH686_22005	0.64	-1.8
4,484,817	-		OH686_22005	0.64	-2.4
4,484,889	-		OH686_22005	0.69	-3.4
4,484,889	-		OH686_22005	0.69	-2.1
4,484,969	+		OH686_22005	0.75	-2.3
4,484,969	+		OH686_22005	0.75	-2.9
4,484,969	+		OH686_22005	0.75	+0.1
4,484,969	+		OH686_22005	0.75	-1.2
4,484,969	+		OH686_22005	0.75	-0.2
4,484,969	+		OH686_22005	0.75	-2.1
4,484,969	+		OH686_22005	0.75	-1.6
4,484,969	+		OH686_22005	0.75	-0.8
4,484,970	-		OH686_22005	0.75	-2.6
4,484,970	-		OH686_22005	0.75	-1.6
4,484,970	-		OH686_22005	0.75	-1.5
4,484,970	-		OH686_22005	0.75	-2.5
4,484,970	-		OH686_22005	0.75	-1.8
4,484,970	-		OH686_22005	0.75	-0.4
4,484,970	-		OH686_22005	0.75	-1.7
4,484,970	-		OH686_22005	0.75	-2.2
4,484,970	-		OH686_22005	0.75	-2.3
4,484,970	-		OH686_22005	0.75	-1.6
4,484,970	-		OH686_22005	0.75	-2.0
4,485,114	+		OH686_22005	0.85	-1.9
4,485,114	+		OH686_22005	0.85	-1.2
4,485,114	+		OH686_22005	0.85	-1.2
4,485,115	-		OH686_22005	0.85	-3.0
4,485,115	-		OH686_22005	0.85	-0.8
4,485,226	+				-0.2
4,485,226	+				-1.2
4,485,226	+				-0.2
4,485,227	-				-1.0
4,485,227	-				+0.5
4,485,233	+				-1.0
4,485,233	+				-1.0
4,485,233	+				-0.8
4,485,233	+				+0.6
4,485,233	+				-0.5
4,485,233	+				-1.4
4,485,234	-				-3.0
4,485,257	+				-2.0
4,485,258	-				-0.5
4,485,486	+				+0.2
4,485,487	-				+0.2
4,485,492	+				-0.6
4,485,525	+				-0.1
4,485,525	+				-0.3
4,485,525	+				-0.7
4,485,525	+				-0.6
4,485,525	+				-0.1
4,485,525	+				-0.2
4,485,525	+				+0.7
4,485,526	-				-1.3
4,485,526	-				-0.4
4,485,526	-				-0.4
4,485,526	-				-0.0
4,485,526	-				-0.2
4,485,526	-				+0.6
4,485,707	+		OH686_22010	0.32	-0.1
4,485,707	+		OH686_22010	0.32	+0.1
4,485,708	-		OH686_22010	0.32	+0.4
4,485,731	-		OH686_22010	0.35	+0.1
4,485,763	+		OH686_22010	0.40	-0.2
4,485,764	-		OH686_22010	0.40	+0.1
4,485,764	-		OH686_22010	0.40	+1.2
4,485,764	-		OH686_22010	0.40	+0.0
4,485,913	+		OH686_22010	0.60	-0.5
4,485,914	-		OH686_22010	0.61	+0.0
4,486,184	+				+0.8
4,486,184	+				-0.8
4,486,185	-				-0.5
4,486,185	-				+0.4
4,486,185	-				-0.2
4,486,185	-				+0.4
4,486,258	+		OH686_22015	0.22	-1.1
4,486,258	+		OH686_22015	0.22	+0.2
4,486,267	+		OH686_22015	0.25	-0.8
4,486,267	+		OH686_22015	0.25	+0.6
4,486,268	-		OH686_22015	0.25	+0.7