Strain Fitness in Pseudomonas sp. S08-1 around OH686_19455

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,988,705	+		OH686_19450	0.51	+0.2
3,988,705	+		OH686_19450	0.51	-0.4
3,988,705	+		OH686_19450	0.51	-0.3
3,988,705	+		OH686_19450	0.51	+0.4
3,988,705	+		OH686_19450	0.51	+0.4
3,988,705	+		OH686_19450	0.51	+0.6
3,988,705	+		OH686_19450	0.51	+0.4
3,988,705	+		OH686_19450	0.51	-1.3
3,988,705	+		OH686_19450	0.51	-0.1
3,988,706	-		OH686_19450	0.51	-0.7
3,988,706	-		OH686_19450	0.51	-1.2
3,988,706	-		OH686_19450	0.51	+0.1
3,988,706	-		OH686_19450	0.51	-0.2
3,988,706	-		OH686_19450	0.51	-0.6
3,988,706	-		OH686_19450	0.51	+1.1
3,988,706	-		OH686_19450	0.51	-0.7
3,988,706	-		OH686_19450	0.51	-0.5
3,988,706	-		OH686_19450	0.51	-0.8
3,988,706	-		OH686_19450	0.51	-0.3
3,988,706	-		OH686_19450	0.51	-0.4
3,988,706	-		OH686_19450	0.51	-0.4
3,988,706	-		OH686_19450	0.51	+0.0
3,988,706	-		OH686_19450	0.51	-0.9
3,988,706	-		OH686_19450	0.51	-0.5
3,988,706	-		OH686_19450	0.51	-0.3
3,988,706	-		OH686_19450	0.51	-0.2
3,988,706	-		OH686_19450	0.51	+0.5
3,988,755	+		OH686_19450	0.53	-0.9
3,988,756	-		OH686_19450	0.53	+1.3
3,988,791	+		OH686_19450	0.55	+0.7
3,988,791	+		OH686_19450	0.55	+1.4
3,988,791	+		OH686_19450	0.55	-0.3
3,988,791	+		OH686_19450	0.55	-0.9
3,988,791	+		OH686_19450	0.55	-0.1
3,988,792	-		OH686_19450	0.55	-0.9
3,988,792	-		OH686_19450	0.55	+0.2
3,988,852	+		OH686_19450	0.58	-0.1
3,988,853	-		OH686_19450	0.58	-0.7
3,988,870	+		OH686_19450	0.59	-0.7
3,988,871	-		OH686_19450	0.59	+0.3
3,988,943	-		OH686_19450	0.63	-0.5
3,989,052	-		OH686_19450	0.68	-0.3
3,989,132	-		OH686_19450	0.72	+0.0
3,989,203	-		OH686_19450	0.76	-0.1
3,989,203	-		OH686_19450	0.76	-1.6
3,989,207	-		OH686_19450	0.76	-1.5
3,989,207	-		OH686_19450	0.76	+0.6
3,989,207	-		OH686_19450	0.76	+0.3
3,989,254	+		OH686_19450	0.78	-0.1
3,989,255	-		OH686_19450	0.78	-0.5
3,989,255	-		OH686_19450	0.78	+1.5
3,989,255	-		OH686_19450	0.78	-0.0
3,989,296	+		OH686_19450	0.80	-0.9
3,989,296	+		OH686_19450	0.80	-0.5
3,989,296	+		OH686_19450	0.80	-0.1
3,989,297	-		OH686_19450	0.80	-0.4
3,989,358	-		OH686_19450	0.83	+0.4
3,989,358	-		OH686_19450	0.83	-0.1
3,989,358	-		OH686_19450	0.83	-0.9
3,989,497	+				+0.5
3,989,497	+				+1.4
3,989,498	-				-0.1
3,989,498	-				+0.3
3,989,498	-				-0.2
3,989,498	-				-0.4
3,989,498	-				-0.7
3,989,614	-				+1.1
3,989,640	+				-1.2
3,989,667	+				-0.5
3,989,667	+				+0.4
3,989,667	+				-0.6
3,989,667	+				+0.3
3,989,667	+				-1.0
3,989,667	+				-0.7
3,989,667	+				+0.2
3,989,668	-				-0.6
3,989,668	-				+0.8
3,989,668	-				-2.1
3,989,668	-				-1.0
3,989,668	-				-1.1
3,989,670	+				-0.3
3,989,670	+				-0.4
3,989,670	+				-0.5
3,989,670	+				-0.3
3,989,671	-				-0.5
3,989,690	+				+0.7
3,989,690	+				+0.0
3,989,690	+				-0.3
3,989,691	-				-0.8
3,989,691	-				-0.2
3,989,691	-				-2.2
3,989,691	-				-0.8
3,989,691	-				-0.2
3,989,691	-				-0.8
3,989,691	-				-0.2
3,989,691	-				-0.6
3,989,691	-				-1.4
3,989,691	-				-1.0
3,989,691	-				-0.0
3,989,691	-				-0.9
3,989,868	+		OH686_19455	0.89	-2.0
3,989,869	-		OH686_19455	0.89	+0.4
3,989,972	+				-0.5
3,989,972	+				-0.5
3,989,972	+				-0.5
3,989,972	+				-0.5
3,989,972	+				-1.8
3,989,972	+				+0.1
3,989,973	-				-0.7
3,989,973	-				+0.0
3,989,973	-				-1.1
3,989,973	-				-0.0
3,989,973	-				-1.8
3,989,973	-				-1.1
3,989,973	-				+0.5
3,989,973	-				-0.9
3,989,973	-				-0.2
3,990,180	+		OH686_19460	0.18	+0.6
3,990,180	+		OH686_19460	0.18	-0.0
3,990,181	-		OH686_19460	0.18	+1.3
3,990,339	+		OH686_19460	0.27	-2.5
3,990,339	+		OH686_19460	0.27	-1.0
3,990,340	-		OH686_19460	0.28	+0.2
3,990,340	-		OH686_19460	0.28	-0.1
3,990,340	-		OH686_19460	0.28	-0.1
3,990,359	+		OH686_19460	0.29	-0.9
3,990,360	-		OH686_19460	0.29	-0.0
3,990,410	+		OH686_19460	0.32	-1.3
3,990,411	-		OH686_19460	0.32	+0.3
3,990,411	-		OH686_19460	0.32	-0.9
3,990,411	-		OH686_19460	0.32	+0.5
3,990,411	-		OH686_19460	0.32	-0.2
3,990,419	+		OH686_19460	0.32	+1.1
3,990,419	+		OH686_19460	0.32	-0.2
3,990,425	+		OH686_19460	0.33	-0.7
3,990,425	+		OH686_19460	0.33	-0.4
3,990,425	+		OH686_19460	0.33	-0.2
3,990,425	+		OH686_19460	0.33	-0.7
3,990,426	-		OH686_19460	0.33	-0.2
3,990,426	-		OH686_19460	0.33	-0.6
3,990,426	-		OH686_19460	0.33	+0.8
3,990,426	-		OH686_19460	0.33	-0.2
3,990,426	-		OH686_19460	0.33	+0.1
3,990,426	-		OH686_19460	0.33	-0.5
3,990,426	-		OH686_19460	0.33	-0.3
3,990,426	-		OH686_19460	0.33	-0.1
3,990,433	+		OH686_19460	0.33	+0.2
3,990,433	+		OH686_19460	0.33	-0.5
3,990,434	-		OH686_19460	0.33	-0.4
3,990,434	-		OH686_19460	0.33	-0.3
3,990,434	-		OH686_19460	0.33	+0.1
3,990,434	-		OH686_19460	0.33	-0.7
3,990,491	+		OH686_19460	0.37	-0.0
3,990,492	-		OH686_19460	0.37	-0.7
3,990,492	-		OH686_19460	0.37	-0.5
3,990,536	+		OH686_19460	0.39	-0.0
3,990,536	+		OH686_19460	0.39	-0.1
3,990,536	+		OH686_19460	0.39	+1.4
3,990,536	+		OH686_19460	0.39	-0.5
3,990,536	+		OH686_19460	0.39	-0.6
3,990,536	+		OH686_19460	0.39	-0.1
3,990,537	-		OH686_19460	0.40	-1.6
3,990,537	-		OH686_19460	0.40	-0.3
3,990,584	+		OH686_19460	0.42	-0.6
3,990,662	+		OH686_19460	0.47	-0.3
3,990,662	+		OH686_19460	0.47	+0.9
3,990,662	+		OH686_19460	0.47	+0.1
3,990,663	-		OH686_19460	0.47	-0.9
3,990,663	-		OH686_19460	0.47	-0.7
3,990,713	+		OH686_19460	0.50	+0.8
3,990,713	+		OH686_19460	0.50	-0.1
3,990,713	+		OH686_19460	0.50	-0.4
3,990,713	+		OH686_19460	0.50	+0.2
3,990,713	+		OH686_19460	0.50	+0.2
3,990,714	-		OH686_19460	0.50	-0.3
3,990,714	-		OH686_19460	0.50	+0.4
3,990,714	-		OH686_19460	0.50	-0.3
3,990,714	-		OH686_19460	0.50	-0.2
3,990,714	-		OH686_19460	0.50	+0.1
3,990,714	-		OH686_19460	0.50	-1.1
3,990,740	+		OH686_19460	0.52	+0.0
3,990,741	-		OH686_19460	0.52	-0.1
3,990,741	-		OH686_19460	0.52	+0.3