Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_17080 and OH686_17085 overlap by 4 nucleotides OH686_17085 and OH686_17090 overlap by 23 nucleotides OH686_17090 and OH686_17095 are separated by 13 nucleotides
OH686_17080: OH686_17080 - Carbamoyl-phosphate synthase large chain , at 3,566,021 to 3,569,242
_17080
OH686_17085: OH686_17085 - Transcription elongation factor GreA, at 3,569,239 to 3,569,715
_17085
OH686_17090: OH686_17090 - hypothetical protein, at 3,569,693 to 3,570,127
_17090
OH686_17095: OH686_17095 - RNA-binding protein YhbY, at 3,570,141 to 3,570,452
_17095
Position (kb)
3569
3570 Strain fitness (log2 ratio)
-2
-1
0
1 at 3569.248 kb on + strand at 3569.248 kb on + strand at 3569.248 kb on + strand at 3569.248 kb on + strand at 3569.249 kb on - strand at 3569.249 kb on - strand at 3569.249 kb on - strand at 3569.249 kb on - strand at 3569.249 kb on - strand at 3569.249 kb on - strand at 3569.291 kb on + strand, within OH686_17085 at 3569.291 kb on + strand, within OH686_17085 at 3569.291 kb on + strand, within OH686_17085 at 3569.291 kb on + strand, within OH686_17085 at 3569.291 kb on + strand, within OH686_17085 at 3569.291 kb on + strand, within OH686_17085 at 3569.291 kb on + strand, within OH686_17085 at 3569.291 kb on + strand, within OH686_17085 at 3569.291 kb on + strand, within OH686_17085 at 3569.291 kb on + strand, within OH686_17085 at 3569.292 kb on - strand, within OH686_17085 at 3569.292 kb on - strand, within OH686_17085 at 3569.292 kb on - strand, within OH686_17085 at 3569.292 kb on - strand, within OH686_17085 at 3569.292 kb on - strand, within OH686_17085 at 3569.292 kb on - strand, within OH686_17085 at 3569.292 kb on - strand, within OH686_17085 at 3569.380 kb on + strand, within OH686_17085 at 3569.381 kb on - strand, within OH686_17085 at 3569.381 kb on - strand, within OH686_17085 at 3569.505 kb on + strand, within OH686_17085 at 3569.551 kb on + strand, within OH686_17085 at 3569.551 kb on + strand, within OH686_17085 at 3569.552 kb on - strand, within OH686_17085 at 3569.552 kb on - strand, within OH686_17085 at 3569.686 kb on + strand at 3569.709 kb on + strand at 3569.709 kb on + strand at 3569.710 kb on - strand at 3569.710 kb on - strand at 3569.710 kb on - strand at 3569.710 kb on - strand at 3569.713 kb on + strand at 3569.713 kb on + strand at 3569.713 kb on + strand at 3569.713 kb on + strand at 3569.714 kb on - strand at 3569.714 kb on - strand at 3569.714 kb on - strand at 3569.714 kb on - strand at 3569.714 kb on - strand at 3569.714 kb on - strand at 3570.059 kb on + strand, within OH686_17090 at 3570.059 kb on + strand, within OH686_17090 at 3570.059 kb on + strand, within OH686_17090 at 3570.059 kb on + strand, within OH686_17090 at 3570.059 kb on + strand, within OH686_17090 at 3570.059 kb on + strand, within OH686_17090 at 3570.059 kb on + strand, within OH686_17090 at 3570.060 kb on - strand, within OH686_17090 at 3570.060 kb on - strand, within OH686_17090 at 3570.060 kb on - strand, within OH686_17090 at 3570.060 kb on - strand, within OH686_17090 at 3570.060 kb on - strand, within OH686_17090 at 3570.060 kb on - strand, within OH686_17090 at 3570.060 kb on - strand, within OH686_17090 at 3570.200 kb on - strand, within OH686_17095 at 3570.200 kb on - strand, within OH686_17095 at 3570.452 kb on + strand at 3570.452 kb on + strand at 3570.475 kb on + strand at 3570.475 kb on + strand at 3570.476 kb on - strand at 3570.549 kb on - strand at 3570.549 kb on - strand at 3570.549 kb on - strand at 3570.554 kb on - strand at 3570.617 kb on + strand at 3570.617 kb on + strand at 3570.617 kb on + strand at 3570.617 kb on + strand at 3570.617 kb on + strand at 3570.617 kb on + strand at 3570.617 kb on + strand at 3570.617 kb on + strand at 3570.617 kb on + strand at 3570.618 kb on - strand at 3570.618 kb on - strand at 3570.618 kb on - strand at 3570.618 kb on - strand at 3570.618 kb on - strand at 3570.667 kb on + strand at 3570.667 kb on + strand at 3570.704 kb on + strand at 3570.704 kb on + strand at 3570.704 kb on + strand at 3570.705 kb on - strand at 3570.705 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 3,569,248 + -2.1 3,569,248 + -0.5 3,569,248 + +1.4 3,569,248 + -0.0 3,569,249 - -0.4 3,569,249 - +0.2 3,569,249 - -0.7 3,569,249 - -1.0 3,569,249 - -0.1 3,569,249 - +0.2 3,569,291 + OH686_17085 0.11 -0.6 3,569,291 + OH686_17085 0.11 -0.2 3,569,291 + OH686_17085 0.11 +0.8 3,569,291 + OH686_17085 0.11 -1.2 3,569,291 + OH686_17085 0.11 -0.3 3,569,291 + OH686_17085 0.11 -0.7 3,569,291 + OH686_17085 0.11 -0.6 3,569,291 + OH686_17085 0.11 -0.6 3,569,291 + OH686_17085 0.11 +0.8 3,569,291 + OH686_17085 0.11 -0.3 3,569,292 - OH686_17085 0.11 +0.5 3,569,292 - OH686_17085 0.11 -0.4 3,569,292 - OH686_17085 0.11 +0.8 3,569,292 - OH686_17085 0.11 +0.5 3,569,292 - OH686_17085 0.11 +0.4 3,569,292 - OH686_17085 0.11 -0.6 3,569,292 - OH686_17085 0.11 +0.2 3,569,380 + OH686_17085 0.30 -0.0 3,569,381 - OH686_17085 0.30 +0.0 3,569,381 - OH686_17085 0.30 -0.9 3,569,505 + OH686_17085 0.56 +0.8 3,569,551 + OH686_17085 0.65 -0.9 3,569,551 + OH686_17085 0.65 -0.7 3,569,552 - OH686_17085 0.66 -0.1 3,569,552 - OH686_17085 0.66 -0.2 3,569,686 + +0.4 3,569,709 + +0.0 3,569,709 + -0.6 3,569,710 - -0.2 3,569,710 - +0.5 3,569,710 - +0.9 3,569,710 - -0.5 3,569,713 + -0.4 3,569,713 + -0.2 3,569,713 + -0.2 3,569,713 + +0.2 3,569,714 - +0.0 3,569,714 - -0.2 3,569,714 - -0.4 3,569,714 - +0.7 3,569,714 - -0.0 3,569,714 - +0.5 3,570,059 + OH686_17090 0.84 +0.5 3,570,059 + OH686_17090 0.84 +1.0 3,570,059 + OH686_17090 0.84 +0.7 3,570,059 + OH686_17090 0.84 -0.0 3,570,059 + OH686_17090 0.84 -0.1 3,570,059 + OH686_17090 0.84 +0.4 3,570,059 + OH686_17090 0.84 -0.3 3,570,060 - OH686_17090 0.84 -0.3 3,570,060 - OH686_17090 0.84 -0.6 3,570,060 - OH686_17090 0.84 -0.6 3,570,060 - OH686_17090 0.84 +0.1 3,570,060 - OH686_17090 0.84 -0.2 3,570,060 - OH686_17090 0.84 -0.6 3,570,060 - OH686_17090 0.84 -0.2 3,570,200 - OH686_17095 0.19 +0.1 3,570,200 - OH686_17095 0.19 -0.6 3,570,452 + +0.8 3,570,452 + +0.1 3,570,475 + -0.7 3,570,475 + +0.0 3,570,476 - -0.8 3,570,549 - +0.0 3,570,549 - +0.1 3,570,549 - +0.6 3,570,554 - +0.2 3,570,617 + -0.3 3,570,617 + +0.0 3,570,617 + -0.6 3,570,617 + -1.2 3,570,617 + -0.2 3,570,617 + -1.1 3,570,617 + -1.7 3,570,617 + -0.5 3,570,617 + +0.3 3,570,618 - -1.7 3,570,618 - +1.0 3,570,618 - -0.4 3,570,618 - +0.4 3,570,618 - +0.2 3,570,667 + -0.5 3,570,667 + -0.5 3,570,704 + +0.0 3,570,704 + +0.3 3,570,704 + -0.7 3,570,705 - -0.0 3,570,705 - +0.1
Or see this region's nucleotide sequence