Strain Fitness in Pseudomonas sp. S08-1 around OH686_16515

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,449,396	+				+1.1
3,449,396	+				+0.4
3,449,396	+				-0.3
3,449,396	+				+0.3
3,449,397	-				-3.2
3,449,397	-				+0.8
3,449,397	-				+0.2
3,449,426	+				+0.5
3,449,426	+				+0.9
3,449,427	-				+0.5
3,449,427	-				-0.3
3,449,428	+				-1.1
3,449,428	+				-0.2
3,449,428	+				+0.7
3,449,428	+				-0.0
3,449,428	+				+0.2
3,449,428	+				-1.0
3,449,429	-				-0.4
3,449,429	-				-0.1
3,449,429	-				+0.5
3,449,429	-				-1.2
3,449,429	-				+0.0
3,449,440	+				+0.6
3,449,440	+				+0.8
3,449,441	-				-1.4
3,449,441	-				-0.2
3,449,441	-				-0.3
3,449,441	-				+0.2
3,449,451	+				-0.4
3,449,451	+				+0.7
3,449,452	-				+0.5
3,449,452	-				-0.4
3,449,452	-				-0.0
3,449,495	+				+0.7
3,449,501	+				-1.0
3,449,501	+				-0.1
3,449,501	+				-0.2
3,449,501	+				-0.6
3,449,501	+				+1.5
3,449,502	-				+0.2
3,449,502	-				-1.2
3,449,502	-				+1.6
3,449,513	+				-0.6
3,449,513	+				+0.1
3,449,513	+				+2.5
3,449,513	+				-0.2
3,449,513	+				-0.2
3,449,513	+				+0.6
3,449,513	+				+0.3
3,449,513	+				-0.4
3,449,513	+				-0.5
3,449,514	-				+0.4
3,449,514	-				+0.5
3,449,514	-				+0.9
3,449,514	-				-1.2
3,449,514	-				-0.2
3,449,514	-				+0.9
3,449,514	-				-0.2
3,449,514	-				+0.4
3,449,514	-				-0.8
3,449,516	+				+0.1
3,449,516	+				-0.7
3,449,516	+				-1.7
3,449,516	+				+0.3
3,449,516	+				+0.9
3,449,516	+				-0.3
3,449,516	+				-0.3
3,449,516	+				-0.9
3,449,516	+				+0.4
3,449,517	-				-0.7
3,449,517	-				+1.3
3,449,517	-				-0.1
3,449,517	-				+1.1
3,449,517	-				+0.3
3,449,570	-				-0.3
3,449,651	+		OH686_16510	0.17	+1.2
3,449,693	+		OH686_16510	0.26	-0.8
3,449,693	+		OH686_16510	0.26	-0.4
3,449,693	+		OH686_16510	0.26	-0.3
3,449,694	-		OH686_16510	0.26	+0.0
3,449,704	+		OH686_16510	0.28	-0.2
3,449,704	+		OH686_16510	0.28	+0.3
3,449,704	+		OH686_16510	0.28	-0.4
3,449,704	+		OH686_16510	0.28	+0.1
3,449,704	+		OH686_16510	0.28	+0.4
3,449,704	+		OH686_16510	0.28	-0.6
3,449,704	+		OH686_16510	0.28	-0.1
3,449,705	-		OH686_16510	0.29	-0.1
3,449,705	-		OH686_16510	0.29	-0.8
3,449,705	-		OH686_16510	0.29	+0.1
3,449,705	-		OH686_16510	0.29	-0.3
3,449,705	-		OH686_16510	0.29	-1.4
3,449,705	-		OH686_16510	0.29	-0.6
3,449,705	-		OH686_16510	0.29	+0.2
3,449,738	+		OH686_16510	0.35	-2.1
3,449,738	+		OH686_16510	0.35	+0.3
3,449,739	-		OH686_16510	0.36	-1.1
3,449,750	+		OH686_16510	0.38	+0.1
3,449,750	+		OH686_16510	0.38	-1.2
3,449,750	+		OH686_16510	0.38	+0.8
3,449,751	-		OH686_16510	0.38	-0.9
3,449,751	-		OH686_16510	0.38	-0.4
3,449,751	-		OH686_16510	0.38	+0.6
3,449,751	-		OH686_16510	0.38	-0.1
3,449,751	-		OH686_16510	0.38	-1.4
3,449,796	-		OH686_16510	0.47	+0.2
3,449,842	+		OH686_16510	0.57	+0.6
3,449,842	+		OH686_16510	0.57	-0.9
3,449,843	-		OH686_16510	0.57	-0.1
3,449,879	+		OH686_16510	0.65	+0.6
3,449,879	+		OH686_16510	0.65	-1.8
3,449,880	-		OH686_16510	0.65	-0.2
3,449,880	-		OH686_16510	0.65	-1.8
3,449,892	+		OH686_16510	0.68	+0.1
3,449,892	+		OH686_16510	0.68	-1.7
3,449,947	+		OH686_16510	0.79	-0.8
3,449,947	+		OH686_16510	0.79	-0.3
3,449,947	+		OH686_16510	0.79	-0.0
3,449,947	+		OH686_16510	0.79	-0.3
3,449,947	+		OH686_16510	0.79	-0.6
3,449,947	+		OH686_16510	0.79	-0.2
3,449,948	-		OH686_16510	0.79	+0.4
3,449,948	-		OH686_16510	0.79	-0.0
3,449,948	-		OH686_16510	0.79	+0.3
3,449,948	-		OH686_16510	0.79	-0.9
3,449,948	-		OH686_16510	0.79	-0.9
3,449,948	-		OH686_16510	0.79	-1.9
3,449,956	+		OH686_16510	0.81	-0.2
3,449,957	-		OH686_16510	0.81	-0.2
3,449,957	-		OH686_16510	0.81	+0.2
3,450,048	+				+0.1
3,450,048	+				-0.3
3,450,049	-				-0.0
3,450,049	-				+0.1
3,450,049	-				-0.1
3,450,054	+				-0.3
3,450,054	+				-0.8
3,450,054	+				-0.1
3,450,054	+				-0.3
3,450,054	+				-0.5
3,450,054	+				-0.1
3,450,054	+				-0.3
3,450,054	+				-0.3
3,450,054	+				+0.5
3,450,054	+				-0.4
3,450,054	+				-0.6
3,450,054	+				+0.4
3,450,055	-				-0.1
3,450,055	-				+0.7
3,450,055	-				+0.4
3,450,055	-				-0.6
3,450,055	-				+0.1
3,450,055	-				-0.2
3,450,055	-				-0.8
3,450,067	+				-0.3
3,450,067	+				+0.5
3,450,067	+				-0.3
3,450,067	+				-0.1
3,450,067	+				+0.0
3,450,067	+				-0.0
3,450,067	+				+0.1
3,450,067	+				+0.3
3,450,067	+				-0.4
3,450,067	+				+0.3
3,450,067	+				-1.0
3,450,067	+				-0.8
3,450,067	+				-0.1
3,450,068	-				-0.3
3,450,068	-				+0.1
3,450,068	-				+0.5
3,450,068	-				+0.1
3,450,068	-				-0.7
3,450,068	-				+0.1
3,450,068	-				-1.5
3,450,068	-				-0.3
3,450,068	-				-1.1
3,450,068	-				-0.3
3,450,068	-				-0.6
3,450,277	+				-0.1
3,450,277	+				-0.6
3,450,278	-				-0.1
3,450,309	+				-0.1
3,450,309	+				-0.3
3,450,309	+				+0.2
3,450,310	-				-1.0
3,450,310	-				-0.2
3,450,310	-				-1.0
3,450,310	-				+0.4
3,450,310	-				-0.5
3,450,329	-				-0.4
3,450,329	-				-0.2
3,450,331	+				+0.0
3,450,331	+				-0.7
3,450,331	+				+0.3
3,450,331	+				+0.1
3,450,331	+				+0.0
3,450,331	+				-0.6
3,450,331	+				-0.2
3,450,331	+				+0.9
3,450,331	+				-0.5
3,450,331	+				+0.1
3,450,331	+				-0.5
3,450,331	+				+0.2
3,450,331	+				+0.3
3,450,331	+				-1.2
3,450,331	+				-0.7
3,450,331	+				-1.2
3,450,331	+				-0.1
3,450,331	+				-0.1
3,450,332	-				+0.5
3,450,332	-				-1.6
3,450,332	-				+0.5
3,450,332	-				-0.8
3,450,332	-				-0.3
3,450,332	-				-1.5
3,450,332	-				-0.1
3,450,332	-				+0.3
3,450,332	-				+1.7
3,450,332	-				-0.3
3,450,332	-				-0.4
3,450,332	-				+0.5
3,450,332	-				-0.3
3,450,332	-				+0.5
3,450,332	-				+1.0
3,450,332	-				-0.2
3,450,332	-				+0.8
3,450,332	-				-0.7
3,450,332	-				-0.5
3,450,349	+				-0.7
3,450,349	+				-0.3
3,450,350	-				+0.4
3,450,350	-				-0.2
3,450,359	+				+1.6
3,450,359	+				-0.7
3,450,359	+				+0.4
3,450,360	-				+0.6
3,450,360	-				+0.3
3,450,360	-				+1.5
3,450,409	+				-0.6
3,450,409	+				+1.1
3,450,409	+				-0.2
3,450,409	+				-0.0
3,450,409	+				+0.2
3,450,410	-				-1.0
3,450,410	-				+1.0
3,450,410	-				-0.1
3,450,410	-				-0.5
3,450,410	-				-1.7
3,450,410	-				+1.4
3,450,410	-				-0.1
3,450,410	-				-0.5
3,450,410	-				+0.2
3,450,410	-				-1.0
3,450,410	-				-0.6
3,450,434	+				-0.6
3,450,434	+				-0.1
3,450,434	+				+0.3
3,450,435	-				-0.0
3,450,435	-				-0.7
3,450,435	-				+0.3
3,450,475	+		OH686_16515	0.14	-0.2
3,450,573	-		OH686_16515	0.27	+0.1
3,450,573	-		OH686_16515	0.27	-0.2
3,450,573	-		OH686_16515	0.27	-0.1
3,450,573	-		OH686_16515	0.27	+0.1
3,450,573	-		OH686_16515	0.27	+0.3
3,450,599	+		OH686_16515	0.31	+0.3
3,450,600	-		OH686_16515	0.31	+0.4
3,450,646	+		OH686_16515	0.37	-0.3
3,450,646	+		OH686_16515	0.37	-0.6
3,450,646	+		OH686_16515	0.37	-0.2
3,450,647	-		OH686_16515	0.37	-0.4
3,450,647	-		OH686_16515	0.37	-0.2
3,450,647	-		OH686_16515	0.37	-1.2
3,450,766	+		OH686_16515	0.53	-0.1
3,450,771	+		OH686_16515	0.54	-0.6
3,450,771	+		OH686_16515	0.54	-0.6
3,450,771	+		OH686_16515	0.54	-0.9
3,450,772	-		OH686_16515	0.54	-0.6
3,450,772	-		OH686_16515	0.54	-0.5
3,450,873	+		OH686_16515	0.67	-1.0
3,450,873	+		OH686_16515	0.67	+0.7
3,450,873	+		OH686_16515	0.67	-0.7
3,450,873	+		OH686_16515	0.67	-0.3
3,450,874	-		OH686_16515	0.68	-0.0
3,450,893	+		OH686_16515	0.70	+1.1
3,450,893	+		OH686_16515	0.70	-0.4
3,450,893	+		OH686_16515	0.70	+0.5
3,450,893	+		OH686_16515	0.70	+0.9
3,450,893	+		OH686_16515	0.70	-0.4
3,450,893	+		OH686_16515	0.70	-0.1
3,450,893	+		OH686_16515	0.70	-0.7
3,450,894	-		OH686_16515	0.70	+0.4
3,450,894	-		OH686_16515	0.70	+0.1
3,450,894	-		OH686_16515	0.70	-1.4
3,450,894	-		OH686_16515	0.70	+0.3
3,450,894	-		OH686_16515	0.70	-0.5
3,450,894	-		OH686_16515	0.70	+0.7
3,450,895	+		OH686_16515	0.70	-0.1
3,450,895	+		OH686_16515	0.70	+0.4
3,450,896	-		OH686_16515	0.71	-0.2
3,450,896	-		OH686_16515	0.71	+0.0
3,450,896	-		OH686_16515	0.71	-0.5
3,450,896	-		OH686_16515	0.71	-0.3
3,450,984	-		OH686_16515	0.82	-0.2
3,450,984	-		OH686_16515	0.82	-0.3
3,450,984	-		OH686_16515	0.82	+0.2
3,450,984	-		OH686_16515	0.82	-0.2
3,450,984	-		OH686_16515	0.82	-0.1
3,450,984	-		OH686_16515	0.82	-0.1
3,450,984	-		OH686_16515	0.82	-0.3
3,450,984	-		OH686_16515	0.82	-0.4
3,450,984	-		OH686_16515	0.82	-0.3
3,450,984	-		OH686_16515	0.82	-0.6
3,450,984	-		OH686_16515	0.82	+0.5
3,451,176	+				-0.3
3,451,176	+				+0.1
3,451,176	+				-0.7
3,451,176	+				-0.5
3,451,176	+				-0.1
3,451,176	+				-2.1
3,451,177	-				-0.3
3,451,177	-				-0.5
3,451,177	-				-0.6
3,451,177	-				-0.8
3,451,177	-				-0.2
3,451,177	-				+0.3
3,451,177	-				+0.3
3,451,177	-				-0.5
3,451,177	-				-0.2
3,451,177	-				-0.1
3,451,177	-				+0.3
3,451,178	+				-0.4
3,451,178	+				-0.1
3,451,178	+				+0.0
3,451,178	+				+0.5
3,451,178	+				+0.5
3,451,178	+				-0.5
3,451,179	-				+1.1
3,451,179	-				+0.3
3,451,179	-				+0.3
3,451,227	+				-0.4
3,451,227	+				+1.2
3,451,227	+				-0.7
3,451,227	+				-0.2
3,451,227	+				-0.1
3,451,228	-				+0.3
3,451,228	-				-0.9
3,451,228	-				-0.4
3,451,228	-				-0.5
3,451,228	-				+0.5
3,451,257	+				+0.2
3,451,257	+				+0.1
3,451,257	+				+0.4
3,451,258	-				-0.2
3,451,258	-				-0.4
3,451,258	-				-0.3
3,451,258	-				-1.1
3,451,258	-				-0.1
3,451,258	-				+2.2
3,451,258	-				+0.5
3,451,259	+				-1.4
3,451,259	+				-0.5
3,451,259	+				+0.6
3,451,259	+				-1.2
3,451,259	+				+0.1
3,451,259	+				+0.3
3,451,259	+				+0.7
3,451,260	-				-0.9
3,451,260	-				-0.3
3,451,260	-				-0.8
3,451,260	-				+0.4
3,451,260	-				+0.1
3,451,260	-				-0.1
3,451,260	-				+0.2
3,451,260	-				-0.4
3,451,260	-				+0.5
3,451,260	-				+0.2
3,451,294	+				+0.4
3,451,294	+				+0.1
3,451,295	-				+1.0
3,451,295	-				-0.6
3,451,295	-				+0.3
3,451,295	-				+0.2
3,451,307	-				+0.1
3,451,372	+				-2.3
3,451,372	+				-2.6
3,451,372	+				-1.8
3,451,372	+				-0.8
3,451,372	+				-2.0
3,451,373	-				-1.2
3,451,373	-				-0.6
3,451,373	-				-0.7
3,451,416	+		OH686_16520	0.13	-2.3
3,451,416	+		OH686_16520	0.13	-2.7
3,451,416	+		OH686_16520	0.13	-0.8
3,451,416	+		OH686_16520	0.13	-2.5
3,451,416	+		OH686_16520	0.13	-1.1
3,451,416	+		OH686_16520	0.13	+0.5
3,451,417	-		OH686_16520	0.13	-2.3
3,451,417	-		OH686_16520	0.13	-2.2
3,451,417	-		OH686_16520	0.13	-3.8
3,451,417	-		OH686_16520	0.13	-2.0
3,451,417	-		OH686_16520	0.13	-1.1
3,451,417	-		OH686_16520	0.13	-1.1
3,451,417	-		OH686_16520	0.13	-2.0
3,451,417	-		OH686_16520	0.13	-1.0
3,451,475	+		OH686_16520	0.20	+1.7
3,451,475	+		OH686_16520	0.20	-2.0
3,451,475	+		OH686_16520	0.20	-0.4
3,451,475	+		OH686_16520	0.20	-2.7
3,451,476	-		OH686_16520	0.20	-0.9
3,451,476	-		OH686_16520	0.20	-2.1
3,451,476	-		OH686_16520	0.20	-2.3
3,451,650	-		OH686_16520	0.41	-0.4
3,451,663	+		OH686_16520	0.42	-3.5
3,451,663	+		OH686_16520	0.42	-3.1
3,451,663	+		OH686_16520	0.42	-2.0
3,451,664	-		OH686_16520	0.42	-2.3
3,451,664	-		OH686_16520	0.42	-1.3
3,451,664	-		OH686_16520	0.42	-2.4
3,451,664	-		OH686_16520	0.42	-1.4
3,451,682	+		OH686_16520	0.44	-2.5
3,451,683	-		OH686_16520	0.45	-1.8
3,451,684	+		OH686_16520	0.45	-3.3
3,451,684	+		OH686_16520	0.45	-1.1
3,451,684	+		OH686_16520	0.45	-0.6
3,451,684	+		OH686_16520	0.45	-0.3
3,451,684	+		OH686_16520	0.45	-2.7
3,451,684	+		OH686_16520	0.45	-2.8
3,451,684	+		OH686_16520	0.45	-4.2
3,451,685	-		OH686_16520	0.45	-1.7
3,451,685	-		OH686_16520	0.45	-1.9
3,451,685	-		OH686_16520	0.45	+0.7
3,451,685	-		OH686_16520	0.45	-0.0
3,451,685	-		OH686_16520	0.45	-1.8
3,451,685	-		OH686_16520	0.45	-1.6
3,451,685	-		OH686_16520	0.45	-0.6
3,451,685	-		OH686_16520	0.45	+1.0
3,451,685	-		OH686_16520	0.45	-0.2
3,451,685	-		OH686_16520	0.45	-0.6
3,451,685	-		OH686_16520	0.45	-0.7
3,451,685	-		OH686_16520	0.45	-2.1
3,451,708	+		OH686_16520	0.47	-2.2
3,451,708	+		OH686_16520	0.47	-1.7
3,451,709	-		OH686_16520	0.48	-1.2
3,451,709	-		OH686_16520	0.48	-1.5
3,451,709	-		OH686_16520	0.48	-1.7
3,451,709	-		OH686_16520	0.48	-2.0
3,451,761	+		OH686_16520	0.54	-1.4
3,451,761	+		OH686_16520	0.54	-0.4
3,451,761	+		OH686_16520	0.54	-1.1
3,451,762	-		OH686_16520	0.54	-2.3
3,451,762	-		OH686_16520	0.54	-1.9
3,451,762	-		OH686_16520	0.54	-0.9
3,451,762	-		OH686_16520	0.54	-2.7
3,451,938	+		OH686_16520	0.75	-0.6
3,451,938	+		OH686_16520	0.75	-1.6
3,451,938	+		OH686_16520	0.75	-2.5
3,451,939	-		OH686_16520	0.75	-1.4
3,451,939	-		OH686_16520	0.75	-0.4
3,452,066	+		OH686_16520	0.90	-2.2
3,452,067	-		OH686_16520	0.90	-2.4