Strain Fitness in Pseudomonas sp. S08-1 around OH686_15060

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,161,359	+				-0.5
3,161,359	+				+0.2
3,161,359	+				+0.7
3,161,360	-				-0.3
3,161,360	-				+0.7
3,161,360	-				-0.3
3,161,360	-				+0.4
3,161,360	-				-0.1
3,161,360	-				-1.9
3,161,360	-				+0.6
3,161,360	-				+0.5
3,161,360	-				-0.0
3,161,360	-				-0.4
3,161,360	-				-0.5
3,161,403	+				-1.8
3,161,404	-				-0.5
3,161,404	-				-0.5
3,161,404	-				+1.3
3,161,460	+				-2.0
3,161,461	-				-1.6
3,161,707	-		OH686_15060	0.23	-0.2
3,161,837	+		OH686_15060	0.37	-0.5
3,161,885	+		OH686_15060	0.42	-0.7
3,161,885	+		OH686_15060	0.42	-1.8
3,161,885	+		OH686_15060	0.42	-0.6
3,161,885	+		OH686_15060	0.42	-0.6
3,161,885	+		OH686_15060	0.42	-0.7
3,161,886	-		OH686_15060	0.42	+0.2
3,161,988	+		OH686_15060	0.53	-1.7
3,161,989	-		OH686_15060	0.53	-1.5
3,162,005	+		OH686_15060	0.54	-1.6
3,162,005	+		OH686_15060	0.54	-1.6
3,162,005	+		OH686_15060	0.54	-0.3
3,162,005	+		OH686_15060	0.54	-3.2
3,162,005	+		OH686_15060	0.54	-1.0
3,162,005	+		OH686_15060	0.54	-0.0
3,162,005	+		OH686_15060	0.54	-0.9
3,162,005	+		OH686_15060	0.54	-0.6
3,162,005	+		OH686_15060	0.54	+0.3
3,162,006	-		OH686_15060	0.55	-0.1
3,162,006	-		OH686_15060	0.55	-1.6
3,162,006	-		OH686_15060	0.55	-1.4
3,162,006	-		OH686_15060	0.55	+0.3
3,162,006	-		OH686_15060	0.55	-1.4
3,162,086	+		OH686_15060	0.63	-0.1
3,162,086	+		OH686_15060	0.63	-2.1
3,162,086	+		OH686_15060	0.63	+0.8
3,162,086	+		OH686_15060	0.63	-0.5
3,162,087	-		OH686_15060	0.63	-0.9
3,162,087	-		OH686_15060	0.63	-0.2
3,162,087	-		OH686_15060	0.63	-1.3
3,162,087	-		OH686_15060	0.63	-2.6
3,162,087	-		OH686_15060	0.63	-0.7
3,162,308	+		OH686_15060	0.87	-2.1
3,162,309	-		OH686_15060	0.87	-0.4
3,162,338	+				-0.6
3,162,338	+				-1.3
3,162,338	+				-2.8
3,162,338	+				+0.0
3,162,338	+				-0.4
3,162,338	+				-0.6
3,162,338	+				-1.0
3,162,338	+				-1.7
3,162,338	+				-1.2
3,162,338	+				-0.4
3,162,338	+				-0.5
3,162,338	+				-0.9
3,162,338	+				-0.8
3,162,338	+				-1.5
3,162,338	+				+0.3
3,162,339	-				-0.4
3,162,339	-				-1.6
3,162,339	-				-1.0
3,162,339	-				-1.3
3,162,339	-				-0.3
3,162,339	-				-2.0
3,162,339	-				-0.7
3,162,339	-				-1.1
3,162,339	-				-1.5
3,162,339	-				-0.8
3,162,339	-				-0.7
3,162,339	-				-1.5
3,162,339	-				-0.4
3,162,340	+				-1.0
3,162,340	+				-0.0
3,162,340	+				-2.5
3,162,340	+				-1.2
3,162,340	+				-1.4
3,162,340	+				-0.5
3,162,340	+				-1.6
3,162,340	+				-0.6
3,162,340	+				-2.5
3,162,341	-				-0.9
3,162,341	-				-1.0
3,162,341	-				+0.7
3,162,341	-				-0.8
3,162,341	-				-2.7
3,162,341	-				-0.5
3,162,342	+				+0.1
3,162,342	+				-2.4
3,162,342	+				-2.6
3,162,342	+				-0.6
3,162,342	+				-0.6
3,162,342	+				-0.4
3,162,342	+				-1.1
3,162,342	+				-1.4
3,162,342	+				-0.6
3,162,342	+				-0.7
3,162,342	+				+0.3
3,162,343	-				-0.9
3,162,343	-				-0.9
3,162,343	-				-0.6
3,162,343	-				+0.5
3,162,343	-				-1.3
3,162,343	-				-0.8
3,162,343	-				-1.0
3,162,343	-				-0.7
3,162,343	-				-1.5
3,162,343	-				-0.1
3,162,343	-				-1.0
3,162,343	-				-3.1
3,162,343	-				-1.6
3,162,343	-				-1.3
3,162,343	-				-0.7
3,162,343	-				-0.6
3,162,482	+				-1.3
3,162,482	+				-0.6
3,162,482	+				-1.0
3,162,483	-				-0.3
3,162,483	-				+0.1
3,162,483	-				-1.3
3,162,483	-				-1.0
3,162,516	+		OH686_15065	0.13	-0.0
3,162,516	+		OH686_15065	0.13	-0.7
3,162,517	-		OH686_15065	0.13	-0.2
3,162,517	-		OH686_15065	0.13	-1.8
3,162,517	-		OH686_15065	0.13	-1.5
3,162,517	-		OH686_15065	0.13	-0.0
3,162,614	-		OH686_15065	0.28	-0.2
3,162,614	-		OH686_15065	0.28	-1.1
3,162,614	-		OH686_15065	0.28	-1.4
3,162,614	-		OH686_15065	0.28	-1.6
3,162,614	-		OH686_15065	0.28	-1.1
3,162,614	-		OH686_15065	0.28	-2.1
3,162,614	-		OH686_15065	0.28	-1.5
3,162,614	-		OH686_15065	0.28	+0.7
3,162,652	+		OH686_15065	0.33	-0.5
3,162,653	-		OH686_15065	0.34	+1.5
3,162,760	+		OH686_15065	0.50	+0.7
3,162,760	+		OH686_15065	0.50	-0.7
3,162,761	-		OH686_15065	0.50	-1.1
3,162,761	-		OH686_15065	0.50	-0.3
3,162,761	-		OH686_15065	0.50	-1.4
3,162,904	+		OH686_15065	0.71	+0.6
3,162,904	+		OH686_15065	0.71	-1.5
3,162,904	+		OH686_15065	0.71	-0.5
3,162,904	+		OH686_15065	0.71	-0.7
3,162,904	+		OH686_15065	0.71	-0.3
3,162,904	+		OH686_15065	0.71	-1.8
3,162,904	+		OH686_15065	0.71	+0.4
3,162,904	+		OH686_15065	0.71	-0.3
3,162,905	-		OH686_15065	0.71	-0.8
3,162,905	-		OH686_15065	0.71	-1.3
3,162,905	-		OH686_15065	0.71	+0.9
3,162,905	-		OH686_15065	0.71	-1.0
3,162,905	-		OH686_15065	0.71	-0.0
3,162,905	-		OH686_15065	0.71	-0.6
3,162,905	-		OH686_15065	0.71	-1.1
3,162,905	-		OH686_15065	0.71	-0.5
3,162,905	-		OH686_15065	0.71	-3.4
3,162,905	-		OH686_15065	0.71	-0.5
3,162,921	-		OH686_15065	0.74	+0.2
3,162,921	-		OH686_15065	0.74	-2.4
3,162,991	-		OH686_15065	0.84	-0.3
3,163,043	+				+0.1
3,163,043	+				-1.6
3,163,043	+				-0.4
3,163,043	+				-0.9
3,163,043	+				+0.3
3,163,043	+				-1.6
3,163,043	+				-0.9
3,163,044	-				-0.9
3,163,044	-				-0.8
3,163,044	-				-0.2
3,163,044	-				-0.8
3,163,044	-				-1.4
3,163,339	+		OH686_15070	0.31	-0.7