Strain Fitness in Pseudomonas sp. S08-1 around OH686_13885

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,904,900	+				-0.0
2,904,900	+				+0.4
2,904,901	-				-0.3
2,904,901	-				-0.4
2,904,901	-				+0.1
2,904,918	+				-0.3
2,904,918	+				+0.1
2,904,919	-				-0.2
2,904,919	-				-0.6
2,904,919	-				-0.7
2,904,919	-				-0.5
2,904,919	-				+0.2
2,904,933	+				+0.0
2,904,934	-				-0.8
2,904,934	-				-1.5
2,904,934	-				-1.0
2,904,968	+				-0.1
2,904,968	+				-0.1
2,904,968	+				+1.1
2,904,968	+				+0.7
2,904,968	+				-0.1
2,904,968	+				+0.5
2,904,968	+				-0.7
2,904,969	-				-0.2
2,904,969	-				-0.4
2,904,969	-				-0.2
2,904,969	-				-0.7
2,904,969	-				-1.8
2,904,969	-				+0.3
2,904,969	-				+0.4
2,905,099	+		OH686_13875	0.17	+0.7
2,905,099	+		OH686_13875	0.17	+0.2
2,905,099	+		OH686_13875	0.17	-0.3
2,905,099	+		OH686_13875	0.17	-0.6
2,905,099	+		OH686_13875	0.17	+1.0
2,905,099	+		OH686_13875	0.17	+0.0
2,905,100	-		OH686_13875	0.17	-1.6
2,905,100	-		OH686_13875	0.17	+0.6
2,905,100	-		OH686_13875	0.17	+0.2
2,905,100	-		OH686_13875	0.17	+0.1
2,905,100	-		OH686_13875	0.17	+0.4
2,905,234	+		OH686_13875	0.43	-0.0
2,905,234	+		OH686_13875	0.43	-1.5
2,905,234	+		OH686_13875	0.43	+0.8
2,905,234	+		OH686_13875	0.43	-0.4
2,905,234	+		OH686_13875	0.43	-0.0
2,905,235	-		OH686_13875	0.44	+0.5
2,905,235	-		OH686_13875	0.44	-2.0
2,905,235	-		OH686_13875	0.44	-0.2
2,905,235	-		OH686_13875	0.44	+0.2
2,905,235	-		OH686_13875	0.44	+0.8
2,905,235	-		OH686_13875	0.44	-0.2
2,905,249	+		OH686_13875	0.46	-0.9
2,905,249	+		OH686_13875	0.46	+0.5
2,905,249	+		OH686_13875	0.46	-0.7
2,905,250	-		OH686_13875	0.47	+0.1
2,905,250	-		OH686_13875	0.47	+0.4
2,905,250	-		OH686_13875	0.47	+0.3
2,905,250	-		OH686_13875	0.47	+0.6
2,905,250	-		OH686_13875	0.47	-0.9
2,905,250	-		OH686_13875	0.47	-0.3
2,905,279	+		OH686_13875	0.52	+0.0
2,905,279	+		OH686_13875	0.52	+0.2
2,905,279	+		OH686_13875	0.52	-0.6
2,905,279	+		OH686_13875	0.52	+0.2
2,905,279	+		OH686_13875	0.52	+0.4
2,905,279	+		OH686_13875	0.52	-0.6
2,905,280	-		OH686_13875	0.52	+0.2
2,905,280	-		OH686_13875	0.52	+0.1
2,905,280	-		OH686_13875	0.52	-0.1
2,905,291	+		OH686_13875	0.55	+0.1
2,905,291	+		OH686_13875	0.55	-0.7
2,905,291	+		OH686_13875	0.55	-1.2
2,905,291	+		OH686_13875	0.55	-1.1
2,905,292	-		OH686_13875	0.55	-0.0
2,905,292	-		OH686_13875	0.55	-0.5
2,905,292	-		OH686_13875	0.55	+0.1
2,905,292	-		OH686_13875	0.55	-0.6
2,905,417	+		OH686_13875	0.79	+0.5
2,905,417	+		OH686_13875	0.79	-0.4
2,905,417	+		OH686_13875	0.79	+0.4
2,905,417	+		OH686_13875	0.79	-0.5
2,905,417	+		OH686_13875	0.79	-0.3
2,905,417	+		OH686_13875	0.79	+0.1
2,905,418	-		OH686_13875	0.80	+0.4
2,905,418	-		OH686_13875	0.80	-0.6
2,905,418	-		OH686_13875	0.80	-0.4
2,905,418	-		OH686_13875	0.80	+0.1
2,905,418	-		OH686_13875	0.80	+0.2
2,905,481	+				-0.0
2,905,481	+				+0.5
2,905,481	+				-0.5
2,905,481	+				-0.1
2,905,481	+				+0.1
2,905,481	+				+1.1
2,905,481	+				+1.1
2,905,482	-				-0.5
2,905,482	-				+0.1
2,905,482	-				-1.0
2,905,482	-				-0.4
2,905,482	-				+0.2
2,905,482	-				+0.2
2,905,560	+		OH686_13880	0.18	-0.5
2,905,560	+		OH686_13880	0.18	-0.5
2,905,560	+		OH686_13880	0.18	-0.7
2,905,560	+		OH686_13880	0.18	-0.7
2,905,560	+		OH686_13880	0.18	+0.0
2,905,560	+		OH686_13880	0.18	-0.3
2,905,560	+		OH686_13880	0.18	-0.3
2,905,560	+		OH686_13880	0.18	+0.2
2,905,561	-		OH686_13880	0.18	-0.4
2,905,561	-		OH686_13880	0.18	-1.0
2,905,561	-		OH686_13880	0.18	+0.2
2,905,594	+		OH686_13880	0.31	+0.1
2,905,594	+		OH686_13880	0.31	-0.7
2,905,594	+		OH686_13880	0.31	+0.2
2,905,594	+		OH686_13880	0.31	-1.0
2,905,594	+		OH686_13880	0.31	+0.3
2,905,595	-		OH686_13880	0.31	+0.0
2,905,595	-		OH686_13880	0.31	-0.3
2,905,595	-		OH686_13880	0.31	-0.0
2,905,595	-		OH686_13880	0.31	-0.2
2,905,676	+		OH686_13880	0.62	-0.3
2,905,676	+		OH686_13880	0.62	-0.8
2,905,676	+		OH686_13880	0.62	+0.3
2,905,677	-		OH686_13880	0.63	-0.8
2,905,677	-		OH686_13880	0.63	-0.8
2,905,677	-		OH686_13880	0.63	-0.2
2,905,677	-		OH686_13880	0.63	-0.2
2,905,677	-		OH686_13880	0.63	+0.6
2,905,677	-		OH686_13880	0.63	+0.4
2,905,917	+				-2.0
2,905,917	+				-2.2
2,905,917	+				-2.8
2,905,918	-				-2.0
2,905,918	-				-3.6
2,905,918	-				-1.9
2,905,918	-				-5.2
2,905,918	-				-1.8
2,905,918	-				-2.5
2,905,999	+		OH686_13885	0.14	-5.1
2,905,999	+		OH686_13885	0.14	-1.6
2,905,999	+		OH686_13885	0.14	-2.7
2,905,999	+		OH686_13885	0.14	-1.3
2,905,999	+		OH686_13885	0.14	-4.0
2,905,999	+		OH686_13885	0.14	-5.2
2,905,999	+		OH686_13885	0.14	-2.3
2,905,999	+		OH686_13885	0.14	-2.1
2,905,999	+		OH686_13885	0.14	-4.4
2,905,999	+		OH686_13885	0.14	-2.8
2,905,999	+		OH686_13885	0.14	-2.2
2,905,999	+		OH686_13885	0.14	-3.6
2,906,000	+		OH686_13885	0.14	-1.5
2,906,000	-		OH686_13885	0.14	-3.0
2,906,000	-		OH686_13885	0.14	-4.8
2,906,000	-		OH686_13885	0.14	-0.5
2,906,000	-		OH686_13885	0.14	-3.7
2,906,000	-		OH686_13885	0.14	-3.9
2,906,000	-		OH686_13885	0.14	-3.5
2,906,000	-		OH686_13885	0.14	-3.7
2,906,000	-		OH686_13885	0.14	-2.0
2,906,062	+		OH686_13885	0.19	-3.8
2,906,062	+		OH686_13885	0.19	-1.9
2,906,062	+		OH686_13885	0.19	-3.2
2,906,063	-		OH686_13885	0.19	-4.7
2,906,063	-		OH686_13885	0.19	-2.8
2,906,063	-		OH686_13885	0.19	-3.6
2,906,230	+		OH686_13885	0.31	-3.0
2,906,230	+		OH686_13885	0.31	-4.5
2,906,230	+		OH686_13885	0.31	-1.3
2,906,230	+		OH686_13885	0.31	-3.0
2,906,231	-		OH686_13885	0.31	-3.6
2,906,231	-		OH686_13885	0.31	-2.6
2,906,231	-		OH686_13885	0.31	-4.5
2,906,231	-		OH686_13885	0.31	-3.4
2,906,566	+		OH686_13885	0.55	-3.7
2,906,566	+		OH686_13885	0.55	-2.4
2,906,566	+		OH686_13885	0.55	-1.6
2,906,566	+		OH686_13885	0.55	-2.2
2,906,567	-		OH686_13885	0.55	-3.7
2,906,567	-		OH686_13885	0.55	-3.5
2,906,567	-		OH686_13885	0.55	-4.7
2,906,567	-		OH686_13885	0.55	-2.2
2,906,567	-		OH686_13885	0.55	-3.7
2,906,641	+		OH686_13885	0.60	-2.5
2,906,641	+		OH686_13885	0.60	-3.4
2,906,642	-		OH686_13885	0.60	-2.8
2,906,642	-		OH686_13885	0.60	-3.9
2,907,253	+				-1.0
2,907,256	+				-1.3
2,907,256	+				-0.3
2,907,256	+				+0.2
2,907,257	-				+0.4
2,907,257	-				-0.5
2,907,257	-				-0.5
2,907,257	-				-0.2
2,907,257	-				-1.6
2,907,257	-				-0.9
2,907,604	+		OH686_13890	0.19	-0.5
2,907,605	-		OH686_13890	0.19	-1.6
2,907,605	-		OH686_13890	0.19	-0.0
2,907,605	-		OH686_13890	0.19	-0.0
2,907,735	+		OH686_13890	0.31	+0.1
2,907,735	+		OH686_13890	0.31	+0.3
2,907,736	-		OH686_13890	0.31	-0.2
2,907,738	+		OH686_13890	0.31	+0.7
2,907,738	+		OH686_13890	0.31	+0.5
2,907,739	-		OH686_13890	0.31	-0.8
2,907,739	-		OH686_13890	0.31	+0.5
2,907,739	-		OH686_13890	0.31	-0.1
2,907,739	-		OH686_13890	0.31	-0.1
2,907,739	-		OH686_13890	0.31	-1.2
2,907,739	-		OH686_13890	0.31	+0.2
2,907,783	+		OH686_13890	0.35	-0.5
2,907,783	+		OH686_13890	0.35	-0.7
2,907,784	-		OH686_13890	0.35	-0.6
2,907,784	-		OH686_13890	0.35	+0.9
2,907,784	-		OH686_13890	0.35	-0.4
2,907,834	+		OH686_13890	0.40	-0.1
2,907,834	+		OH686_13890	0.40	+1.8
2,907,834	+		OH686_13890	0.40	-1.9
2,907,835	-		OH686_13890	0.40	+0.7
2,907,835	-		OH686_13890	0.40	+0.9
2,907,835	-		OH686_13890	0.40	+0.3
2,907,835	-		OH686_13890	0.40	+0.2
2,907,835	-		OH686_13890	0.40	-0.2
2,907,835	-		OH686_13890	0.40	-0.0
2,907,835	-		OH686_13890	0.40	-0.0
2,907,840	+		OH686_13890	0.40	-1.5
2,907,840	+		OH686_13890	0.40	-0.8
2,907,840	+		OH686_13890	0.40	-0.7
2,907,840	+		OH686_13890	0.40	-0.5
2,907,840	+		OH686_13890	0.40	-0.0
2,907,841	-		OH686_13890	0.41	-0.2
2,907,935	+		OH686_13890	0.49	-0.6
2,907,935	+		OH686_13890	0.49	+1.7
2,907,935	+		OH686_13890	0.49	-0.4
2,907,935	+		OH686_13890	0.49	-1.0
2,907,936	-		OH686_13890	0.49	+0.6
2,907,936	-		OH686_13890	0.49	+0.5
2,907,936	-		OH686_13890	0.49	-0.8
2,908,083	+		OH686_13890	0.63	+0.1
2,908,083	+		OH686_13890	0.63	-1.9
2,908,083	+		OH686_13890	0.63	+0.1
2,908,083	+		OH686_13890	0.63	+0.2
2,908,083	+		OH686_13890	0.63	+0.7
2,908,083	+		OH686_13890	0.63	-0.6
2,908,083	+		OH686_13890	0.63	+0.5
2,908,083	+		OH686_13890	0.63	-0.8
2,908,083	+		OH686_13890	0.63	+0.1
2,908,084	-		OH686_13890	0.63	+0.5
2,908,084	-		OH686_13890	0.63	-2.2
2,908,084	-		OH686_13890	0.63	-0.0
2,908,084	-		OH686_13890	0.63	+0.1
2,908,084	-		OH686_13890	0.63	-0.5
2,908,084	-		OH686_13890	0.63	-0.1
2,908,084	-		OH686_13890	0.63	-1.7
2,908,120	+		OH686_13890	0.66	-0.1
2,908,121	-		OH686_13890	0.66	-0.4
2,908,121	-		OH686_13890	0.66	-0.8
2,908,121	-		OH686_13890	0.66	+0.1
2,908,121	-		OH686_13890	0.66	+0.1
2,908,180	+		OH686_13890	0.72	-0.1
2,908,180	+		OH686_13890	0.72	-0.5
2,908,180	+		OH686_13890	0.72	-0.0
2,908,181	-		OH686_13890	0.72	-0.4
2,908,181	-		OH686_13890	0.72	+0.4
2,908,181	-		OH686_13890	0.72	-0.2
2,908,181	-		OH686_13890	0.72	-1.4