Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4461

Experiment: MS_media with arsenate 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_4460 and EX28DRAFT_4461 overlap by 4 nucleotidesEX28DRAFT_4461 and EX28DRAFT_4462 overlap by 4 nucleotides EX28DRAFT_4460: EX28DRAFT_4460 - Membrane protein involved in the export of O-antigen and teichoic acid, at 27,190 to 28,440 _4460 EX28DRAFT_4461: EX28DRAFT_4461 - 4-alpha-L-fucosyltransferase glycosyl transferase group 56, at 28,437 to 29,516 _4461 EX28DRAFT_4462: EX28DRAFT_4462 - WzyE protein, at 29,513 to 30,865 _4462 Position (kb) 28 29 30Strain fitness (log2 ratio) -3 -2 -1 0 1at 28.412 kb on + strandat 28.412 kb on + strandat 28.428 kb on + strandat 28.547 kb on + strand, within EX28DRAFT_4461at 28.734 kb on - strand, within EX28DRAFT_4461at 28.916 kb on - strand, within EX28DRAFT_4461at 28.921 kb on - strand, within EX28DRAFT_4461at 29.156 kb on + strand, within EX28DRAFT_4461at 29.276 kb on - strand, within EX28DRAFT_4461at 29.300 kb on - strand, within EX28DRAFT_4461at 29.354 kb on + strand, within EX28DRAFT_4461at 29.438 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM
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28,412 + -0.9
28,412 + +0.2
28,428 + -0.0
28,547 + EX28DRAFT_4461 0.10 -1.4
28,734 - EX28DRAFT_4461 0.28 -0.2
28,916 - EX28DRAFT_4461 0.44 -0.3
28,921 - EX28DRAFT_4461 0.45 -0.6
29,156 + EX28DRAFT_4461 0.67 -0.4
29,276 - EX28DRAFT_4461 0.78 -0.9
29,300 - EX28DRAFT_4461 0.80 -0.1
29,354 + EX28DRAFT_4461 0.85 -3.0
29,438 + -1.0

Or see this region's nucleotide sequence