Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4433 and EX28DRAFT_4434 are separated by 56 nucleotides EX28DRAFT_4434 and EX28DRAFT_4435 are separated by 53 nucleotides EX28DRAFT_4435 and EX28DRAFT_4436 are separated by 100 nucleotides EX28DRAFT_4436 and EX28DRAFT_4437 are separated by 118 nucleotides EX28DRAFT_4437 and EX28DRAFT_4438 are separated by 29 nucleotides
EX28DRAFT_4433: EX28DRAFT_4433 - 5S, at 25 to 140
_4433
EX28DRAFT_4434: EX28DRAFT_4434 - tRNA, at 197 to 273
_4434
EX28DRAFT_4435: EX28DRAFT_4435 - tRNA, at 327 to 402
_4435
EX28DRAFT_4436: EX28DRAFT_4436 - Transcriptional regulator, at 503 to 1,324
_4436
EX28DRAFT_4437: EX28DRAFT_4437 - Uncharacterized protein conserved in bacteria, at 1,443 to 1,781
_4437
EX28DRAFT_4438: EX28DRAFT_4438 - Mg chelatase-related protein, at 1,811 to 3,331
_4438
Position (kb) 0
1
2 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 0.287 kb on + strand at 0.405 kb on + strand at 0.405 kb on + strand at 0.405 kb on + strand at 0.469 kb on + strand at 0.469 kb on + strand at 0.577 kb on - strand at 0.786 kb on - strand, within EX28DRAFT_4436 at 0.790 kb on - strand, within EX28DRAFT_4436 at 0.829 kb on - strand, within EX28DRAFT_4436 at 1.060 kb on + strand, within EX28DRAFT_4436 at 1.061 kb on - strand, within EX28DRAFT_4436 at 1.072 kb on + strand, within EX28DRAFT_4436 at 1.087 kb on + strand, within EX28DRAFT_4436 at 1.249 kb on - strand at 1.389 kb on + strand at 1.389 kb on + strand at 1.393 kb on + strand at 1.394 kb on - strand at 1.413 kb on - strand at 1.672 kb on + strand, within EX28DRAFT_4437 at 1.683 kb on + strand, within EX28DRAFT_4437 at 1.683 kb on + strand, within EX28DRAFT_4437 at 1.684 kb on - strand, within EX28DRAFT_4437 at 1.684 kb on - strand, within EX28DRAFT_4437 at 1.761 kb on + strand at 1.813 kb on - strand at 1.958 kb on + strand at 1.958 kb on + strand at 1.959 kb on - strand at 2.061 kb on - strand, within EX28DRAFT_4438 at 2.080 kb on - strand, within EX28DRAFT_4438 at 2.114 kb on + strand, within EX28DRAFT_4438 at 2.114 kb on + strand, within EX28DRAFT_4438 at 2.225 kb on - strand, within EX28DRAFT_4438 at 2.263 kb on + strand, within EX28DRAFT_4438
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 287 + -2.8 405 + +0.4 405 + +1.1 405 + -0.8 469 + -0.1 469 + +0.1 577 - -1.1 786 - EX28DRAFT_4436 0.34 -0.7 790 - EX28DRAFT_4436 0.35 -1.6 829 - EX28DRAFT_4436 0.40 -2.9 1,060 + EX28DRAFT_4436 0.68 -2.2 1,061 - EX28DRAFT_4436 0.68 -2.8 1,072 + EX28DRAFT_4436 0.69 -0.9 1,087 + EX28DRAFT_4436 0.71 -2.0 1,249 - -1.4 1,389 + -1.4 1,389 + -1.6 1,393 + -1.0 1,394 - -1.0 1,413 - -1.3 1,672 + EX28DRAFT_4437 0.68 -2.0 1,683 + EX28DRAFT_4437 0.71 -2.3 1,683 + EX28DRAFT_4437 0.71 -0.7 1,684 - EX28DRAFT_4437 0.71 -2.4 1,684 - EX28DRAFT_4437 0.71 -1.3 1,761 + -0.7 1,813 - +0.4 1,958 + -1.0 1,958 + -0.9 1,959 - -1.5 2,061 - EX28DRAFT_4438 0.16 +0.3 2,080 - EX28DRAFT_4438 0.18 +0.3 2,114 + EX28DRAFT_4438 0.20 +0.0 2,114 + EX28DRAFT_4438 0.20 -0.4 2,225 - EX28DRAFT_4438 0.27 +0.2 2,263 + EX28DRAFT_4438 0.30 +0.2
Or see this region's nucleotide sequence