Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4419 and EX28DRAFT_4420 are separated by 88 nucleotides EX28DRAFT_4420 and EX28DRAFT_4421 are separated by 9 nucleotides EX28DRAFT_4421 and EX28DRAFT_4422 are separated by 74 nucleotides
EX28DRAFT_4419: EX28DRAFT_4419 - acetylornithine deacetylase (ArgE), at 86,469 to 87,620
_4419
EX28DRAFT_4420: EX28DRAFT_4420 - N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38), at 87,709 to 88,713
_4420
EX28DRAFT_4421: EX28DRAFT_4421 - N-acetylglutamate kinase (EC 2.7.2.8), at 88,723 to 89,496
_4421
EX28DRAFT_4422: EX28DRAFT_4422 - argininosuccinate lyase, at 89,571 to 90,944
_4422
Position (kb)
87
88
89 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 87.163 kb on + strand, within EX28DRAFT_4419 at 87.211 kb on + strand, within EX28DRAFT_4419 at 87.634 kb on + strand at 87.634 kb on + strand at 87.634 kb on + strand at 87.634 kb on + strand at 87.634 kb on + strand at 87.635 kb on - strand at 87.635 kb on - strand at 87.635 kb on - strand at 87.635 kb on - strand at 87.645 kb on - strand at 87.647 kb on + strand at 87.654 kb on - strand at 87.697 kb on + strand at 87.697 kb on + strand at 87.697 kb on + strand at 87.698 kb on - strand at 87.698 kb on - strand at 87.718 kb on - strand at 87.761 kb on + strand at 87.762 kb on - strand at 87.766 kb on + strand at 87.786 kb on + strand at 87.787 kb on - strand at 87.787 kb on - strand at 88.132 kb on - strand, within EX28DRAFT_4420 at 88.327 kb on + strand, within EX28DRAFT_4420 at 88.635 kb on - strand at 88.674 kb on + strand at 88.675 kb on - strand at 88.707 kb on + strand at 88.737 kb on + strand at 88.754 kb on + strand at 89.048 kb on + strand, within EX28DRAFT_4421 at 89.484 kb on + strand at 89.484 kb on + strand at 89.490 kb on - strand at 89.515 kb on + strand at 89.549 kb on + strand at 89.670 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 87,163 + EX28DRAFT_4419 0.60 -1.3 87,211 + EX28DRAFT_4419 0.64 -0.8 87,634 + -0.6 87,634 + +0.3 87,634 + -0.2 87,634 + -1.1 87,634 + +0.0 87,635 - -2.3 87,635 - -0.5 87,635 - -2.0 87,635 - -2.4 87,645 - +1.0 87,647 + -0.5 87,654 - -1.7 87,697 + -0.3 87,697 + -1.5 87,697 + +0.0 87,698 - -1.2 87,698 - -2.9 87,718 - -3.2 87,761 + -1.2 87,762 - -2.9 87,766 + -1.0 87,786 + -0.8 87,787 - -2.7 87,787 - +2.0 88,132 - EX28DRAFT_4420 0.42 +2.0 88,327 + EX28DRAFT_4420 0.61 -2.2 88,635 - +1.0 88,674 + -2.8 88,675 - +1.4 88,707 + -0.8 88,737 + +2.0 88,754 + +1.0 89,048 + EX28DRAFT_4421 0.42 -2.1 89,484 + -0.7 89,484 + -1.3 89,490 - -2.2 89,515 + -1.2 89,549 + +0.3 89,670 - -1.7
Or see this region's nucleotide sequence