Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4407

Experiment: MS_media with arsenate 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_4406 and EX28DRAFT_4407 are separated by 198 nucleotidesEX28DRAFT_4407 and EX28DRAFT_4408 are separated by 119 nucleotides EX28DRAFT_4406: EX28DRAFT_4406 - cell division protein FtsN, at 68,172 to 69,065 _4406 EX28DRAFT_4407: EX28DRAFT_4407 - Transcriptional regulators, at 69,264 to 70,289 _4407 EX28DRAFT_4408: EX28DRAFT_4408 - replication restart DNA helicase PriA, at 70,409 to 72,604 _4408 Position (kb) 69 70 71Strain fitness (log2 ratio) -2 -1 0 1 2at 68.300 kb on + strand, within EX28DRAFT_4406at 68.300 kb on + strand, within EX28DRAFT_4406at 68.301 kb on - strand, within EX28DRAFT_4406at 68.301 kb on - strand, within EX28DRAFT_4406at 68.486 kb on + strand, within EX28DRAFT_4406at 68.600 kb on - strand, within EX28DRAFT_4406at 69.185 kb on - strandat 69.189 kb on - strandat 69.213 kb on - strandat 69.216 kb on + strandat 69.217 kb on - strandat 69.261 kb on - strandat 69.261 kb on - strandat 69.265 kb on + strandat 69.443 kb on + strand, within EX28DRAFT_4407at 69.443 kb on + strand, within EX28DRAFT_4407at 69.444 kb on - strand, within EX28DRAFT_4407at 69.507 kb on + strand, within EX28DRAFT_4407at 69.608 kb on + strand, within EX28DRAFT_4407at 69.608 kb on + strand, within EX28DRAFT_4407at 69.608 kb on + strand, within EX28DRAFT_4407at 69.628 kb on + strand, within EX28DRAFT_4407at 69.628 kb on + strand, within EX28DRAFT_4407at 69.737 kb on + strand, within EX28DRAFT_4407at 69.738 kb on - strand, within EX28DRAFT_4407at 69.738 kb on - strand, within EX28DRAFT_4407at 70.132 kb on + strand, within EX28DRAFT_4407at 70.200 kb on + strandat 70.201 kb on - strandat 70.345 kb on + strandat 70.345 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM
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68,300 + EX28DRAFT_4406 0.14 -0.2
68,300 + EX28DRAFT_4406 0.14 -0.5
68,301 - EX28DRAFT_4406 0.14 -1.9
68,301 - EX28DRAFT_4406 0.14 -0.8
68,486 + EX28DRAFT_4406 0.35 -0.8
68,600 - EX28DRAFT_4406 0.48 -0.4
69,185 - -0.2
69,189 - -0.3
69,213 - -0.1
69,216 + -1.2
69,217 - -0.2
69,261 - +0.1
69,261 - +0.5
69,265 + -0.1
69,443 + EX28DRAFT_4407 0.17 -0.9
69,443 + EX28DRAFT_4407 0.17 -0.5
69,444 - EX28DRAFT_4407 0.18 +1.7
69,507 + EX28DRAFT_4407 0.24 -1.1
69,608 + EX28DRAFT_4407 0.34 -0.1
69,608 + EX28DRAFT_4407 0.34 -0.1
69,608 + EX28DRAFT_4407 0.34 +0.4
69,628 + EX28DRAFT_4407 0.35 -0.7
69,628 + EX28DRAFT_4407 0.35 -0.8
69,737 + EX28DRAFT_4407 0.46 -0.1
69,738 - EX28DRAFT_4407 0.46 -0.8
69,738 - EX28DRAFT_4407 0.46 -0.7
70,132 + EX28DRAFT_4407 0.85 -0.4
70,200 + -0.8
70,201 - +0.1
70,345 + -0.1
70,345 + +2.0

Or see this region's nucleotide sequence