Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4340 and EX28DRAFT_4341 are separated by 27 nucleotides EX28DRAFT_4341 and EX28DRAFT_4342 are separated by 23 nucleotides
EX28DRAFT_4340: EX28DRAFT_4340 - Putative homoserine kinase type II (protein kinase fold), at 1,887 to 2,873
_4340
EX28DRAFT_4341: EX28DRAFT_4341 - Protein-disulfide isomerase, at 2,901 to 3,524
_4341
EX28DRAFT_4342: EX28DRAFT_4342 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 3,548 to 4,456
_4342
Position (kb)
2
3
4 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1.918 kb on + strand at 1.919 kb on - strand at 2.055 kb on + strand, within EX28DRAFT_4340 at 2.157 kb on - strand, within EX28DRAFT_4340 at 2.157 kb on - strand, within EX28DRAFT_4340 at 2.191 kb on - strand, within EX28DRAFT_4340 at 2.191 kb on - strand, within EX28DRAFT_4340 at 2.193 kb on + strand, within EX28DRAFT_4340 at 2.194 kb on - strand, within EX28DRAFT_4340 at 2.194 kb on - strand, within EX28DRAFT_4340 at 2.194 kb on - strand, within EX28DRAFT_4340 at 2.194 kb on - strand, within EX28DRAFT_4340 at 2.241 kb on - strand, within EX28DRAFT_4340 at 2.281 kb on + strand, within EX28DRAFT_4340 at 2.281 kb on + strand, within EX28DRAFT_4340 at 2.282 kb on - strand, within EX28DRAFT_4340 at 2.340 kb on + strand, within EX28DRAFT_4340 at 2.362 kb on + strand, within EX28DRAFT_4340 at 2.640 kb on + strand, within EX28DRAFT_4340 at 2.641 kb on - strand, within EX28DRAFT_4340 at 2.660 kb on + strand, within EX28DRAFT_4340 at 2.660 kb on + strand, within EX28DRAFT_4340 at 2.712 kb on + strand, within EX28DRAFT_4340 at 2.716 kb on - strand, within EX28DRAFT_4340 at 2.716 kb on - strand, within EX28DRAFT_4340 at 2.806 kb on + strand at 2.806 kb on + strand at 2.810 kb on + strand at 2.810 kb on + strand at 2.811 kb on - strand at 2.811 kb on - strand at 2.868 kb on + strand at 2.868 kb on + strand at 2.872 kb on - strand at 2.896 kb on + strand at 2.897 kb on - strand at 3.319 kb on - strand, within EX28DRAFT_4341 at 3.319 kb on - strand, within EX28DRAFT_4341 at 3.429 kb on + strand, within EX28DRAFT_4341 at 3.430 kb on - strand, within EX28DRAFT_4341 at 3.470 kb on + strand at 3.470 kb on + strand at 3.487 kb on - strand at 3.487 kb on - strand at 3.568 kb on - strand at 3.578 kb on - strand at 3.588 kb on - strand at 3.588 kb on - strand at 3.616 kb on + strand at 3.617 kb on - strand at 3.620 kb on - strand at 3.653 kb on - strand, within EX28DRAFT_4342 at 3.664 kb on - strand, within EX28DRAFT_4342 at 3.664 kb on - strand, within EX28DRAFT_4342 at 3.664 kb on - strand, within EX28DRAFT_4342 at 3.740 kb on - strand, within EX28DRAFT_4342 at 3.742 kb on + strand, within EX28DRAFT_4342 at 3.757 kb on + strand, within EX28DRAFT_4342 at 3.758 kb on - strand, within EX28DRAFT_4342 at 3.937 kb on + strand, within EX28DRAFT_4342 at 3.938 kb on - strand, within EX28DRAFT_4342 at 3.938 kb on - strand, within EX28DRAFT_4342 at 4.013 kb on + strand, within EX28DRAFT_4342 at 4.013 kb on + strand, within EX28DRAFT_4342 at 4.017 kb on + strand, within EX28DRAFT_4342 at 4.018 kb on - strand, within EX28DRAFT_4342 at 4.048 kb on + strand, within EX28DRAFT_4342 at 4.048 kb on + strand, within EX28DRAFT_4342 at 4.110 kb on + strand, within EX28DRAFT_4342 at 4.111 kb on - strand, within EX28DRAFT_4342 at 4.111 kb on - strand, within EX28DRAFT_4342 at 4.194 kb on + strand, within EX28DRAFT_4342 at 4.211 kb on - strand, within EX28DRAFT_4342 at 4.290 kb on + strand, within EX28DRAFT_4342 at 4.290 kb on + strand, within EX28DRAFT_4342 at 4.291 kb on - strand, within EX28DRAFT_4342 at 4.291 kb on - strand, within EX28DRAFT_4342 at 4.357 kb on + strand, within EX28DRAFT_4342 at 4.393 kb on + strand at 4.410 kb on - strand at 4.427 kb on + strand at 4.433 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,918 + -1.6 1,919 - +0.5 2,055 + EX28DRAFT_4340 0.17 -0.3 2,157 - EX28DRAFT_4340 0.27 -0.3 2,157 - EX28DRAFT_4340 0.27 +0.1 2,191 - EX28DRAFT_4340 0.31 -1.0 2,191 - EX28DRAFT_4340 0.31 -0.6 2,193 + EX28DRAFT_4340 0.31 -0.1 2,194 - EX28DRAFT_4340 0.31 -0.1 2,194 - EX28DRAFT_4340 0.31 +0.2 2,194 - EX28DRAFT_4340 0.31 -0.1 2,194 - EX28DRAFT_4340 0.31 +0.6 2,241 - EX28DRAFT_4340 0.36 +0.2 2,281 + EX28DRAFT_4340 0.40 +1.6 2,281 + EX28DRAFT_4340 0.40 -0.5 2,282 - EX28DRAFT_4340 0.40 -0.5 2,340 + EX28DRAFT_4340 0.46 -0.4 2,362 + EX28DRAFT_4340 0.48 -0.3 2,640 + EX28DRAFT_4340 0.76 +0.1 2,641 - EX28DRAFT_4340 0.76 -0.5 2,660 + EX28DRAFT_4340 0.78 +0.0 2,660 + EX28DRAFT_4340 0.78 -0.2 2,712 + EX28DRAFT_4340 0.84 +0.3 2,716 - EX28DRAFT_4340 0.84 +0.1 2,716 - EX28DRAFT_4340 0.84 -1.8 2,806 + +0.0 2,806 + +0.5 2,810 + +0.4 2,810 + +0.5 2,811 - -2.0 2,811 - -0.5 2,868 + -0.1 2,868 + -0.5 2,872 - -1.5 2,896 + -3.0 2,897 - -3.6 3,319 - EX28DRAFT_4341 0.67 -2.4 3,319 - EX28DRAFT_4341 0.67 -0.3 3,429 + EX28DRAFT_4341 0.85 -3.6 3,430 - EX28DRAFT_4341 0.85 -3.9 3,470 + -3.4 3,470 + -2.0 3,487 - -3.3 3,487 - -1.8 3,568 - +0.7 3,578 - -0.4 3,588 - +0.1 3,588 - -0.7 3,616 + +1.6 3,617 - -0.4 3,620 - -0.5 3,653 - EX28DRAFT_4342 0.12 -0.9 3,664 - EX28DRAFT_4342 0.13 +0.3 3,664 - EX28DRAFT_4342 0.13 +0.8 3,664 - EX28DRAFT_4342 0.13 +0.3 3,740 - EX28DRAFT_4342 0.21 -0.0 3,742 + EX28DRAFT_4342 0.21 +0.0 3,757 + EX28DRAFT_4342 0.23 +0.6 3,758 - EX28DRAFT_4342 0.23 +0.2 3,937 + EX28DRAFT_4342 0.43 +0.0 3,938 - EX28DRAFT_4342 0.43 +0.6 3,938 - EX28DRAFT_4342 0.43 -0.1 4,013 + EX28DRAFT_4342 0.51 +0.6 4,013 + EX28DRAFT_4342 0.51 +0.6 4,017 + EX28DRAFT_4342 0.52 +0.1 4,018 - EX28DRAFT_4342 0.52 +0.1 4,048 + EX28DRAFT_4342 0.55 -0.2 4,048 + EX28DRAFT_4342 0.55 -1.0 4,110 + EX28DRAFT_4342 0.62 +0.2 4,111 - EX28DRAFT_4342 0.62 +0.4 4,111 - EX28DRAFT_4342 0.62 +0.3 4,194 + EX28DRAFT_4342 0.71 -0.4 4,211 - EX28DRAFT_4342 0.73 +0.1 4,290 + EX28DRAFT_4342 0.82 -0.5 4,290 + EX28DRAFT_4342 0.82 -0.2 4,291 - EX28DRAFT_4342 0.82 -0.7 4,291 - EX28DRAFT_4342 0.82 +0.1 4,357 + EX28DRAFT_4342 0.89 +0.1 4,393 + -0.4 4,410 - +0.2 4,427 + -0.6 4,433 + +0.8
Or see this region's nucleotide sequence