Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4307 and EX28DRAFT_4308 are separated by 71 nucleotides EX28DRAFT_4308 and EX28DRAFT_4309 are separated by 370 nucleotides
EX28DRAFT_4307: EX28DRAFT_4307 - Maltoporin (phage lambda and maltose receptor), at 110,268 to 111,581
_4307
EX28DRAFT_4308: EX28DRAFT_4308 - ABC-type sugar transport systems, ATPase components, at 111,653 to 112,762
_4308
EX28DRAFT_4309: EX28DRAFT_4309 - Maltose-binding periplasmic proteins/domains, at 113,133 to 114,323
_4309
Position (kb)
111
112
113 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 110.653 kb on + strand, within EX28DRAFT_4307 at 110.654 kb on - strand, within EX28DRAFT_4307 at 110.654 kb on - strand, within EX28DRAFT_4307 at 110.657 kb on + strand, within EX28DRAFT_4307 at 110.657 kb on + strand, within EX28DRAFT_4307 at 110.665 kb on + strand, within EX28DRAFT_4307 at 110.665 kb on + strand, within EX28DRAFT_4307 at 110.665 kb on + strand, within EX28DRAFT_4307 at 110.666 kb on - strand, within EX28DRAFT_4307 at 110.666 kb on - strand, within EX28DRAFT_4307 at 110.780 kb on + strand, within EX28DRAFT_4307 at 110.780 kb on + strand, within EX28DRAFT_4307 at 110.780 kb on + strand, within EX28DRAFT_4307 at 110.781 kb on - strand, within EX28DRAFT_4307 at 110.888 kb on - strand, within EX28DRAFT_4307 at 110.888 kb on - strand, within EX28DRAFT_4307 at 110.890 kb on + strand, within EX28DRAFT_4307 at 110.891 kb on - strand, within EX28DRAFT_4307 at 110.891 kb on - strand, within EX28DRAFT_4307 at 110.891 kb on - strand, within EX28DRAFT_4307 at 111.011 kb on + strand, within EX28DRAFT_4307 at 111.011 kb on + strand, within EX28DRAFT_4307 at 111.012 kb on - strand, within EX28DRAFT_4307 at 111.012 kb on - strand, within EX28DRAFT_4307 at 111.012 kb on - strand, within EX28DRAFT_4307 at 111.149 kb on - strand, within EX28DRAFT_4307 at 111.152 kb on - strand, within EX28DRAFT_4307 at 111.307 kb on + strand, within EX28DRAFT_4307 at 111.329 kb on - strand, within EX28DRAFT_4307 at 111.383 kb on - strand, within EX28DRAFT_4307 at 111.409 kb on + strand, within EX28DRAFT_4307 at 111.410 kb on - strand, within EX28DRAFT_4307 at 111.410 kb on - strand, within EX28DRAFT_4307 at 111.488 kb on - strand at 111.584 kb on + strand at 111.585 kb on - strand at 111.655 kb on - strand at 111.671 kb on - strand at 111.671 kb on - strand at 111.758 kb on + strand at 111.759 kb on - strand at 111.818 kb on - strand, within EX28DRAFT_4308 at 111.945 kb on - strand, within EX28DRAFT_4308 at 112.001 kb on + strand, within EX28DRAFT_4308 at 112.063 kb on + strand, within EX28DRAFT_4308 at 112.063 kb on + strand, within EX28DRAFT_4308 at 112.063 kb on + strand, within EX28DRAFT_4308 at 112.099 kb on - strand, within EX28DRAFT_4308 at 112.198 kb on - strand, within EX28DRAFT_4308 at 112.400 kb on + strand, within EX28DRAFT_4308 at 112.477 kb on + strand, within EX28DRAFT_4308 at 112.477 kb on + strand, within EX28DRAFT_4308 at 112.477 kb on + strand, within EX28DRAFT_4308 at 112.478 kb on - strand, within EX28DRAFT_4308 at 112.478 kb on - strand, within EX28DRAFT_4308 at 112.503 kb on + strand, within EX28DRAFT_4308 at 112.512 kb on + strand, within EX28DRAFT_4308 at 112.512 kb on + strand, within EX28DRAFT_4308 at 112.513 kb on - strand, within EX28DRAFT_4308 at 112.639 kb on + strand, within EX28DRAFT_4308 at 112.640 kb on - strand, within EX28DRAFT_4308 at 112.811 kb on - strand at 113.066 kb on - strand at 113.066 kb on - strand at 113.094 kb on + strand at 113.094 kb on + strand at 113.094 kb on + strand at 113.094 kb on + strand at 113.094 kb on + strand at 113.095 kb on - strand at 113.095 kb on - strand at 113.095 kb on - strand at 113.095 kb on - strand at 113.095 kb on - strand at 113.095 kb on - strand at 113.095 kb on - strand at 113.098 kb on + strand at 113.098 kb on + strand at 113.099 kb on - strand at 113.133 kb on - strand at 113.139 kb on - strand at 113.260 kb on - strand, within EX28DRAFT_4309 at 113.260 kb on - strand, within EX28DRAFT_4309 at 113.640 kb on - strand, within EX28DRAFT_4309 at 113.673 kb on + strand, within EX28DRAFT_4309 at 113.673 kb on + strand, within EX28DRAFT_4309 at 113.737 kb on - strand, within EX28DRAFT_4309
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 110,653 + EX28DRAFT_4307 0.29 +1.4 110,654 - EX28DRAFT_4307 0.29 +0.9 110,654 - EX28DRAFT_4307 0.29 +0.8 110,657 + EX28DRAFT_4307 0.30 +0.3 110,657 + EX28DRAFT_4307 0.30 +1.9 110,665 + EX28DRAFT_4307 0.30 -0.5 110,665 + EX28DRAFT_4307 0.30 -0.1 110,665 + EX28DRAFT_4307 0.30 +0.0 110,666 - EX28DRAFT_4307 0.30 -2.5 110,666 - EX28DRAFT_4307 0.30 -0.3 110,780 + EX28DRAFT_4307 0.39 -0.4 110,780 + EX28DRAFT_4307 0.39 -0.2 110,780 + EX28DRAFT_4307 0.39 +0.5 110,781 - EX28DRAFT_4307 0.39 -0.3 110,888 - EX28DRAFT_4307 0.47 +0.1 110,888 - EX28DRAFT_4307 0.47 -0.2 110,890 + EX28DRAFT_4307 0.47 +0.1 110,891 - EX28DRAFT_4307 0.47 -0.1 110,891 - EX28DRAFT_4307 0.47 +1.0 110,891 - EX28DRAFT_4307 0.47 +0.4 111,011 + EX28DRAFT_4307 0.57 +1.1 111,011 + EX28DRAFT_4307 0.57 +0.1 111,012 - EX28DRAFT_4307 0.57 +0.5 111,012 - EX28DRAFT_4307 0.57 +0.4 111,012 - EX28DRAFT_4307 0.57 -0.6 111,149 - EX28DRAFT_4307 0.67 +0.3 111,152 - EX28DRAFT_4307 0.67 +0.4 111,307 + EX28DRAFT_4307 0.79 -0.2 111,329 - EX28DRAFT_4307 0.81 -0.0 111,383 - EX28DRAFT_4307 0.85 +0.4 111,409 + EX28DRAFT_4307 0.87 -0.1 111,410 - EX28DRAFT_4307 0.87 +0.1 111,410 - EX28DRAFT_4307 0.87 +0.3 111,488 - +0.3 111,584 + -0.8 111,585 - +0.7 111,655 - -0.2 111,671 - -0.0 111,671 - +0.1 111,758 + +0.4 111,759 - +0.7 111,818 - EX28DRAFT_4308 0.15 +0.1 111,945 - EX28DRAFT_4308 0.26 -0.3 112,001 + EX28DRAFT_4308 0.31 +2.5 112,063 + EX28DRAFT_4308 0.37 -1.2 112,063 + EX28DRAFT_4308 0.37 +0.1 112,063 + EX28DRAFT_4308 0.37 +0.2 112,099 - EX28DRAFT_4308 0.40 +0.1 112,198 - EX28DRAFT_4308 0.49 -0.4 112,400 + EX28DRAFT_4308 0.67 -0.4 112,477 + EX28DRAFT_4308 0.74 +0.4 112,477 + EX28DRAFT_4308 0.74 -0.1 112,477 + EX28DRAFT_4308 0.74 +0.0 112,478 - EX28DRAFT_4308 0.74 -1.8 112,478 - EX28DRAFT_4308 0.74 -0.1 112,503 + EX28DRAFT_4308 0.77 -0.6 112,512 + EX28DRAFT_4308 0.77 +0.3 112,512 + EX28DRAFT_4308 0.77 +0.7 112,513 - EX28DRAFT_4308 0.77 -1.3 112,639 + EX28DRAFT_4308 0.89 -1.3 112,640 - EX28DRAFT_4308 0.89 -0.8 112,811 - -0.3 113,066 - +0.0 113,066 - -1.2 113,094 + +0.1 113,094 + +0.0 113,094 + -0.8 113,094 + +1.2 113,094 + +0.2 113,095 - -0.2 113,095 - +0.5 113,095 - -0.2 113,095 - -0.9 113,095 - -0.0 113,095 - +0.3 113,095 - -0.3 113,098 + +0.5 113,098 + +0.7 113,099 - +0.0 113,133 - +1.1 113,139 - -0.4 113,260 - EX28DRAFT_4309 0.11 -0.2 113,260 - EX28DRAFT_4309 0.11 -0.1 113,640 - EX28DRAFT_4309 0.43 -0.5 113,673 + EX28DRAFT_4309 0.45 -0.6 113,673 + EX28DRAFT_4309 0.45 +0.3 113,737 - EX28DRAFT_4309 0.51 +0.1
Or see this region's nucleotide sequence