Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4172 and EX28DRAFT_4173 are separated by 311 nucleotides EX28DRAFT_4173 and EX28DRAFT_4174 are separated by 66 nucleotides EX28DRAFT_4174 and EX28DRAFT_4175 are separated by 30 nucleotides
EX28DRAFT_4172: EX28DRAFT_4172 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 156,294 to 156,926
_4172
EX28DRAFT_4173: EX28DRAFT_4173 - Predicted redox protein, regulator of disulfide bond formation, at 157,238 to 157,642
_4173
EX28DRAFT_4174: EX28DRAFT_4174 - Phosphoribulokinase, at 157,709 to 158,578
_4174
EX28DRAFT_4175: EX28DRAFT_4175 - Uncharacterized protein conserved in bacteria, at 158,609 to 158,827
_4175
Position (kb) 157
158 Strain fitness (log2 ratio) -1
0
1
2 at 156.243 kb on + strand at 156.244 kb on - strand at 156.286 kb on - strand at 157.070 kb on - strand at 157.078 kb on - strand at 157.092 kb on - strand at 157.119 kb on - strand at 157.571 kb on + strand, within EX28DRAFT_4173 at 157.571 kb on + strand, within EX28DRAFT_4173 at 157.572 kb on - strand, within EX28DRAFT_4173 at 157.622 kb on + strand at 157.799 kb on + strand, within EX28DRAFT_4174 at 157.804 kb on + strand, within EX28DRAFT_4174 at 157.804 kb on + strand, within EX28DRAFT_4174 at 157.804 kb on + strand, within EX28DRAFT_4174 at 157.805 kb on - strand, within EX28DRAFT_4174 at 157.805 kb on - strand, within EX28DRAFT_4174 at 157.805 kb on - strand, within EX28DRAFT_4174 at 157.805 kb on - strand, within EX28DRAFT_4174 at 157.820 kb on - strand, within EX28DRAFT_4174 at 157.942 kb on + strand, within EX28DRAFT_4174 at 157.943 kb on - strand, within EX28DRAFT_4174 at 157.947 kb on - strand, within EX28DRAFT_4174 at 158.005 kb on + strand, within EX28DRAFT_4174 at 158.005 kb on + strand, within EX28DRAFT_4174 at 158.005 kb on + strand, within EX28DRAFT_4174 at 158.010 kb on + strand, within EX28DRAFT_4174 at 158.010 kb on + strand, within EX28DRAFT_4174 at 158.278 kb on - strand, within EX28DRAFT_4174 at 158.278 kb on - strand, within EX28DRAFT_4174 at 158.278 kb on - strand, within EX28DRAFT_4174 at 158.278 kb on - strand, within EX28DRAFT_4174 at 158.278 kb on - strand, within EX28DRAFT_4174 at 158.377 kb on - strand, within EX28DRAFT_4174 at 158.578 kb on + strand at 158.578 kb on + strand at 158.579 kb on - strand at 158.579 kb on - strand at 158.579 kb on - strand at 158.579 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 156,243 + -0.3 156,244 - -0.7 156,286 - +0.2 157,070 - +0.0 157,078 - +0.2 157,092 - +2.0 157,119 - -0.7 157,571 + EX28DRAFT_4173 0.82 +0.9 157,571 + EX28DRAFT_4173 0.82 +1.0 157,572 - EX28DRAFT_4173 0.82 -1.1 157,622 + +0.0 157,799 + EX28DRAFT_4174 0.10 -0.1 157,804 + EX28DRAFT_4174 0.11 +0.1 157,804 + EX28DRAFT_4174 0.11 -0.5 157,804 + EX28DRAFT_4174 0.11 +0.6 157,805 - EX28DRAFT_4174 0.11 -0.2 157,805 - EX28DRAFT_4174 0.11 +0.6 157,805 - EX28DRAFT_4174 0.11 +0.2 157,805 - EX28DRAFT_4174 0.11 +0.1 157,820 - EX28DRAFT_4174 0.13 -0.0 157,942 + EX28DRAFT_4174 0.27 -0.1 157,943 - EX28DRAFT_4174 0.27 +0.5 157,947 - EX28DRAFT_4174 0.27 -0.2 158,005 + EX28DRAFT_4174 0.34 +0.1 158,005 + EX28DRAFT_4174 0.34 -1.0 158,005 + EX28DRAFT_4174 0.34 -0.0 158,010 + EX28DRAFT_4174 0.35 -0.2 158,010 + EX28DRAFT_4174 0.35 +0.0 158,278 - EX28DRAFT_4174 0.65 -0.4 158,278 - EX28DRAFT_4174 0.65 +1.0 158,278 - EX28DRAFT_4174 0.65 +0.6 158,278 - EX28DRAFT_4174 0.65 +0.4 158,278 - EX28DRAFT_4174 0.65 -0.7 158,377 - EX28DRAFT_4174 0.77 +0.2 158,578 + -0.3 158,578 + +0.0 158,579 - -0.2 158,579 - +0.1 158,579 - -0.3 158,579 - +0.3
Or see this region's nucleotide sequence