Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4155 and EX28DRAFT_4156 are separated by 41 nucleotides EX28DRAFT_4156 and EX28DRAFT_4157 overlap by 8 nucleotides EX28DRAFT_4157 and EX28DRAFT_4158 overlap by 8 nucleotides
EX28DRAFT_4155: EX28DRAFT_4155 - DNA adenine methylase (dam), at 136,475 to 137,287
_4155
EX28DRAFT_4156: EX28DRAFT_4156 - ribulose-phosphate 3-epimerase, at 137,329 to 138,006
_4156
EX28DRAFT_4157: EX28DRAFT_4157 - 2-phosphoglycolate phosphatase, prokaryotic, at 137,999 to 138,760
_4157
EX28DRAFT_4158: EX28DRAFT_4158 - tryptophanyl-tRNA synthetase (EC 6.1.1.2), at 138,753 to 139,757
_4158
Position (kb) 137
138
139 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 137.009 kb on + strand, within EX28DRAFT_4155 at 137.171 kb on - strand, within EX28DRAFT_4155 at 137.183 kb on + strand, within EX28DRAFT_4155 at 137.222 kb on - strand at 137.228 kb on - strand at 137.495 kb on + strand, within EX28DRAFT_4156 at 137.499 kb on + strand, within EX28DRAFT_4156 at 137.710 kb on + strand, within EX28DRAFT_4156 at 137.993 kb on + strand at 137.993 kb on + strand at 138.004 kb on + strand at 138.099 kb on - strand, within EX28DRAFT_4157 at 138.099 kb on - strand, within EX28DRAFT_4157 at 138.138 kb on + strand, within EX28DRAFT_4157 at 138.138 kb on + strand, within EX28DRAFT_4157 at 138.139 kb on - strand, within EX28DRAFT_4157 at 138.259 kb on + strand, within EX28DRAFT_4157 at 138.305 kb on + strand, within EX28DRAFT_4157 at 138.458 kb on + strand, within EX28DRAFT_4157 at 138.458 kb on + strand, within EX28DRAFT_4157 at 138.543 kb on - strand, within EX28DRAFT_4157 at 138.589 kb on + strand, within EX28DRAFT_4157 at 138.590 kb on - strand, within EX28DRAFT_4157 at 138.636 kb on - strand, within EX28DRAFT_4157 at 138.636 kb on - strand, within EX28DRAFT_4157 at 138.647 kb on + strand, within EX28DRAFT_4157 at 138.647 kb on + strand, within EX28DRAFT_4157 at 138.666 kb on + strand, within EX28DRAFT_4157 at 138.774 kb on - strand at 138.813 kb on + strand at 138.814 kb on - strand at 139.051 kb on - strand, within EX28DRAFT_4158 at 139.051 kb on - strand, within EX28DRAFT_4158 at 139.101 kb on + strand, within EX28DRAFT_4158
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 137,009 + EX28DRAFT_4155 0.66 -4.3 137,171 - EX28DRAFT_4155 0.86 -3.4 137,183 + EX28DRAFT_4155 0.87 -5.1 137,222 - -2.9 137,228 - -2.6 137,495 + EX28DRAFT_4156 0.24 +0.4 137,499 + EX28DRAFT_4156 0.25 -1.7 137,710 + EX28DRAFT_4156 0.56 -1.0 137,993 + -0.5 137,993 + +0.3 138,004 + -0.8 138,099 - EX28DRAFT_4157 0.13 -0.6 138,099 - EX28DRAFT_4157 0.13 -1.8 138,138 + EX28DRAFT_4157 0.18 -0.4 138,138 + EX28DRAFT_4157 0.18 -0.0 138,139 - EX28DRAFT_4157 0.18 -2.9 138,259 + EX28DRAFT_4157 0.34 +0.4 138,305 + EX28DRAFT_4157 0.40 +0.4 138,458 + EX28DRAFT_4157 0.60 -0.6 138,458 + EX28DRAFT_4157 0.60 -0.6 138,543 - EX28DRAFT_4157 0.71 -0.6 138,589 + EX28DRAFT_4157 0.77 -0.4 138,590 - EX28DRAFT_4157 0.78 -1.3 138,636 - EX28DRAFT_4157 0.84 -3.0 138,636 - EX28DRAFT_4157 0.84 -2.2 138,647 + EX28DRAFT_4157 0.85 -0.9 138,647 + EX28DRAFT_4157 0.85 -0.5 138,666 + EX28DRAFT_4157 0.88 -0.5 138,774 - -1.7 138,813 + -2.1 138,814 - -0.0 139,051 - EX28DRAFT_4158 0.30 -2.7 139,051 - EX28DRAFT_4158 0.30 -2.9 139,101 + EX28DRAFT_4158 0.35 -1.7
Or see this region's nucleotide sequence