Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4096 and EX28DRAFT_4097 overlap by 4 nucleotides EX28DRAFT_4097 and EX28DRAFT_4098 are separated by 3 nucleotides EX28DRAFT_4098 and EX28DRAFT_4099 overlap by 10 nucleotides EX28DRAFT_4099 and EX28DRAFT_4100 overlap by 14 nucleotides
EX28DRAFT_4095: EX28DRAFT_4095 - Predicted exporter, at 68,545 to 70,869
_4095
EX28DRAFT_4096: EX28DRAFT_4096 - Outer membrane lipoprotein-sorting protein, at 70,838 to 71,443
_4096
EX28DRAFT_4097: EX28DRAFT_4097 - Predicted thioesterase, at 71,440 to 71,862
_4097
EX28DRAFT_4098: EX28DRAFT_4098 - Predicted acyltransferase, at 71,866 to 73,557
_4098
EX28DRAFT_4099: EX28DRAFT_4099 - 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases, at 73,548 to 73,901
_4099
EX28DRAFT_4100: EX28DRAFT_4100 - Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, at 73,888 to 75,249
_4100
Position (kb) 71
72
73
74 Strain fitness (log2 ratio) -1
0
1
2 at 70.959 kb on + strand, within EX28DRAFT_4096 at 70.960 kb on - strand, within EX28DRAFT_4096 at 71.056 kb on + strand, within EX28DRAFT_4096 at 71.147 kb on - strand, within EX28DRAFT_4096 at 71.471 kb on - strand at 71.513 kb on - strand, within EX28DRAFT_4097 at 71.628 kb on + strand, within EX28DRAFT_4097 at 71.629 kb on - strand, within EX28DRAFT_4097 at 71.629 kb on - strand, within EX28DRAFT_4097 at 71.762 kb on + strand, within EX28DRAFT_4097 at 71.771 kb on + strand, within EX28DRAFT_4097 at 71.771 kb on + strand, within EX28DRAFT_4097 at 71.771 kb on + strand, within EX28DRAFT_4097 at 71.772 kb on - strand, within EX28DRAFT_4097 at 71.799 kb on + strand, within EX28DRAFT_4097 at 71.868 kb on - strand at 71.943 kb on - strand at 71.943 kb on - strand at 72.379 kb on - strand, within EX28DRAFT_4098 at 72.695 kb on + strand, within EX28DRAFT_4098 at 72.900 kb on + strand, within EX28DRAFT_4098 at 72.908 kb on - strand, within EX28DRAFT_4098 at 73.188 kb on - strand, within EX28DRAFT_4098 at 73.188 kb on - strand, within EX28DRAFT_4098 at 73.252 kb on - strand, within EX28DRAFT_4098 at 73.302 kb on - strand, within EX28DRAFT_4098 at 73.382 kb on - strand, within EX28DRAFT_4098 at 73.558 kb on - strand at 73.558 kb on - strand at 73.613 kb on - strand, within EX28DRAFT_4099 at 73.751 kb on - strand, within EX28DRAFT_4099 at 73.751 kb on - strand, within EX28DRAFT_4099 at 73.906 kb on + strand at 73.907 kb on - strand at 74.055 kb on + strand, within EX28DRAFT_4100 at 74.055 kb on + strand, within EX28DRAFT_4100 at 74.055 kb on + strand, within EX28DRAFT_4100 at 74.055 kb on + strand, within EX28DRAFT_4100 at 74.055 kb on + strand, within EX28DRAFT_4100 at 74.055 kb on + strand, within EX28DRAFT_4100 at 74.055 kb on + strand, within EX28DRAFT_4100 at 74.055 kb on + strand, within EX28DRAFT_4100 at 74.056 kb on - strand, within EX28DRAFT_4100
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 70,959 + EX28DRAFT_4096 0.20 -0.1 70,960 - EX28DRAFT_4096 0.20 +1.0 71,056 + EX28DRAFT_4096 0.36 -0.6 71,147 - EX28DRAFT_4096 0.51 +0.9 71,471 - +0.5 71,513 - EX28DRAFT_4097 0.17 -0.8 71,628 + EX28DRAFT_4097 0.44 -0.7 71,629 - EX28DRAFT_4097 0.45 -0.1 71,629 - EX28DRAFT_4097 0.45 -0.1 71,762 + EX28DRAFT_4097 0.76 -1.4 71,771 + EX28DRAFT_4097 0.78 -0.3 71,771 + EX28DRAFT_4097 0.78 +0.2 71,771 + EX28DRAFT_4097 0.78 +0.2 71,772 - EX28DRAFT_4097 0.78 -0.1 71,799 + EX28DRAFT_4097 0.85 +0.4 71,868 - +0.1 71,943 - +1.8 71,943 - +0.1 72,379 - EX28DRAFT_4098 0.30 -0.4 72,695 + EX28DRAFT_4098 0.49 -0.2 72,900 + EX28DRAFT_4098 0.61 +1.0 72,908 - EX28DRAFT_4098 0.62 -0.3 73,188 - EX28DRAFT_4098 0.78 +0.4 73,188 - EX28DRAFT_4098 0.78 -0.1 73,252 - EX28DRAFT_4098 0.82 +0.6 73,302 - EX28DRAFT_4098 0.85 -0.1 73,382 - EX28DRAFT_4098 0.90 -0.6 73,558 - +0.3 73,558 - +0.1 73,613 - EX28DRAFT_4099 0.18 -0.9 73,751 - EX28DRAFT_4099 0.57 +0.5 73,751 - EX28DRAFT_4099 0.57 +0.0 73,906 + -0.3 73,907 - -1.2 74,055 + EX28DRAFT_4100 0.12 -0.0 74,055 + EX28DRAFT_4100 0.12 -0.4 74,055 + EX28DRAFT_4100 0.12 -0.4 74,055 + EX28DRAFT_4100 0.12 +0.4 74,055 + EX28DRAFT_4100 0.12 -0.1 74,055 + EX28DRAFT_4100 0.12 +0.1 74,055 + EX28DRAFT_4100 0.12 +0.3 74,055 + EX28DRAFT_4100 0.12 +0.2 74,056 - EX28DRAFT_4100 0.12 -0.5
Or see this region's nucleotide sequence