Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4076 and EX28DRAFT_4077 are separated by 60 nucleotides EX28DRAFT_4077 and EX28DRAFT_4078 are separated by 329 nucleotides EX28DRAFT_4078 and EX28DRAFT_4079 are separated by 5 nucleotides
EX28DRAFT_4076: EX28DRAFT_4076 - integral membrane protein, TerC family, at 51,144 to 52,169
_4076
EX28DRAFT_4077: EX28DRAFT_4077 - HAD-superfamily subfamily IB hydrolase, TIGR01490, at 52,230 to 52,892
_4077
EX28DRAFT_4078: EX28DRAFT_4078 - NlpC/P60 family, at 53,222 to 53,659
_4078
EX28DRAFT_4079: EX28DRAFT_4079 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 53,665 to 54,459
_4079
Position (kb) 52
53 Strain fitness (log2 ratio) -1
0
1
2 at 51.231 kb on - strand at 51.324 kb on + strand, within EX28DRAFT_4076 at 51.325 kb on - strand, within EX28DRAFT_4076 at 51.795 kb on + strand, within EX28DRAFT_4076 at 51.907 kb on - strand, within EX28DRAFT_4076 at 51.907 kb on - strand, within EX28DRAFT_4076 at 51.948 kb on + strand, within EX28DRAFT_4076 at 51.948 kb on + strand, within EX28DRAFT_4076 at 51.948 kb on + strand, within EX28DRAFT_4076 at 52.130 kb on + strand at 52.133 kb on - strand at 52.173 kb on - strand at 52.413 kb on - strand, within EX28DRAFT_4077 at 52.799 kb on + strand, within EX28DRAFT_4077 at 52.892 kb on + strand at 52.904 kb on - strand at 52.933 kb on + strand at 52.942 kb on + strand at 52.943 kb on - strand at 52.943 kb on - strand at 52.957 kb on + strand at 52.957 kb on + strand at 52.958 kb on - strand at 52.960 kb on - strand at 52.960 kb on - strand at 53.046 kb on + strand at 53.069 kb on + strand at 53.073 kb on + strand at 53.117 kb on + strand at 53.117 kb on + strand at 53.117 kb on + strand at 53.117 kb on + strand at 53.132 kb on - strand at 53.140 kb on + strand at 53.140 kb on + strand at 53.141 kb on - strand at 53.351 kb on - strand, within EX28DRAFT_4078 at 53.534 kb on + strand, within EX28DRAFT_4078 at 53.534 kb on + strand, within EX28DRAFT_4078 at 53.534 kb on + strand, within EX28DRAFT_4078 at 53.535 kb on - strand, within EX28DRAFT_4078 at 53.535 kb on - strand, within EX28DRAFT_4078 at 53.535 kb on - strand, within EX28DRAFT_4078 at 53.537 kb on - strand, within EX28DRAFT_4078 at 53.554 kb on + strand, within EX28DRAFT_4078 at 53.554 kb on + strand, within EX28DRAFT_4078 at 53.555 kb on - strand, within EX28DRAFT_4078 at 53.621 kb on + strand at 53.621 kb on + strand at 53.621 kb on + strand at 53.621 kb on + strand at 53.621 kb on + strand at 53.622 kb on - strand at 53.622 kb on - strand at 53.622 kb on - strand at 53.671 kb on - strand at 53.744 kb on + strand at 53.745 kb on - strand, within EX28DRAFT_4079 at 53.745 kb on - strand, within EX28DRAFT_4079 at 53.745 kb on - strand, within EX28DRAFT_4079 at 53.755 kb on - strand, within EX28DRAFT_4079
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 51,231 - +1.6 51,324 + EX28DRAFT_4076 0.18 +0.2 51,325 - EX28DRAFT_4076 0.18 -0.2 51,795 + EX28DRAFT_4076 0.63 -0.4 51,907 - EX28DRAFT_4076 0.74 -0.1 51,907 - EX28DRAFT_4076 0.74 -0.1 51,948 + EX28DRAFT_4076 0.78 -0.4 51,948 + EX28DRAFT_4076 0.78 +0.1 51,948 + EX28DRAFT_4076 0.78 +0.6 52,130 + -0.7 52,133 - -0.3 52,173 - -0.2 52,413 - EX28DRAFT_4077 0.28 -1.7 52,799 + EX28DRAFT_4077 0.86 -0.7 52,892 + +0.2 52,904 - -0.3 52,933 + +0.0 52,942 + -0.3 52,943 - +2.0 52,943 - +0.2 52,957 + +0.3 52,957 + +0.6 52,958 - -0.5 52,960 - -0.2 52,960 - +0.7 53,046 + +1.9 53,069 + -0.6 53,073 + +0.0 53,117 + -0.1 53,117 + -0.2 53,117 + +0.1 53,117 + -0.5 53,132 - +0.5 53,140 + -0.0 53,140 + -0.8 53,141 - +0.5 53,351 - EX28DRAFT_4078 0.29 +0.2 53,534 + EX28DRAFT_4078 0.71 +0.4 53,534 + EX28DRAFT_4078 0.71 +0.0 53,534 + EX28DRAFT_4078 0.71 +0.5 53,535 - EX28DRAFT_4078 0.71 +0.1 53,535 - EX28DRAFT_4078 0.71 +0.2 53,535 - EX28DRAFT_4078 0.71 +0.0 53,537 - EX28DRAFT_4078 0.72 +0.0 53,554 + EX28DRAFT_4078 0.76 +0.2 53,554 + EX28DRAFT_4078 0.76 -0.4 53,555 - EX28DRAFT_4078 0.76 -0.2 53,621 + -0.1 53,621 + +1.1 53,621 + -0.3 53,621 + -0.1 53,621 + -0.1 53,622 - +0.3 53,622 - -0.3 53,622 - +0.6 53,671 - +1.8 53,744 + -0.2 53,745 - EX28DRAFT_4079 0.10 +0.4 53,745 - EX28DRAFT_4079 0.10 +0.1 53,745 - EX28DRAFT_4079 0.10 +0.8 53,755 - EX28DRAFT_4079 0.11 -0.3
Or see this region's nucleotide sequence