Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4017 and EX28DRAFT_4018 are separated by 374 nucleotides EX28DRAFT_4018 and EX28DRAFT_4019 are separated by 90 nucleotides EX28DRAFT_4019 and EX28DRAFT_4020 are separated by 151 nucleotides
EX28DRAFT_4017: EX28DRAFT_4017 - glucose-inhibited division protein A, at 226,415 to 228,304
_4017
EX28DRAFT_4018: EX28DRAFT_4018 - Flavodoxins, at 228,679 to 229,128
_4018
EX28DRAFT_4019: EX28DRAFT_4019 - Transcriptional regulators, at 229,219 to 229,677
_4019
EX28DRAFT_4020: EX28DRAFT_4020 - aspartate-ammonia ligase (EC 6.3.1.1), at 229,829 to 230,821
_4020
Position (kb) 228
229
230 Strain fitness (log2 ratio) -2
-1
0
1
2 at 228.364 kb on - strand at 228.364 kb on - strand at 228.364 kb on - strand at 228.409 kb on - strand at 228.920 kb on + strand, within EX28DRAFT_4018 at 228.921 kb on - strand, within EX28DRAFT_4018 at 228.922 kb on + strand, within EX28DRAFT_4018 at 228.922 kb on + strand, within EX28DRAFT_4018 at 229.145 kb on + strand at 229.163 kb on - strand at 229.163 kb on - strand at 229.163 kb on - strand at 229.163 kb on - strand at 229.163 kb on - strand at 229.234 kb on - strand at 229.308 kb on + strand, within EX28DRAFT_4019 at 229.308 kb on + strand, within EX28DRAFT_4019 at 229.308 kb on + strand, within EX28DRAFT_4019 at 229.308 kb on + strand, within EX28DRAFT_4019 at 229.308 kb on + strand, within EX28DRAFT_4019 at 229.308 kb on + strand, within EX28DRAFT_4019 at 229.309 kb on - strand, within EX28DRAFT_4019 at 229.309 kb on - strand, within EX28DRAFT_4019 at 229.312 kb on + strand, within EX28DRAFT_4019 at 229.312 kb on + strand, within EX28DRAFT_4019 at 229.313 kb on - strand, within EX28DRAFT_4019 at 229.313 kb on - strand, within EX28DRAFT_4019 at 229.351 kb on - strand, within EX28DRAFT_4019 at 229.354 kb on - strand, within EX28DRAFT_4019 at 229.380 kb on - strand, within EX28DRAFT_4019 at 229.380 kb on - strand, within EX28DRAFT_4019 at 229.383 kb on - strand, within EX28DRAFT_4019 at 229.803 kb on - strand at 229.823 kb on + strand at 229.823 kb on + strand at 229.823 kb on + strand at 229.823 kb on + strand at 229.824 kb on - strand at 229.824 kb on - strand at 229.827 kb on + strand at 229.827 kb on + strand at 229.827 kb on + strand at 229.842 kb on - strand at 229.842 kb on - strand at 229.873 kb on - strand at 229.966 kb on + strand, within EX28DRAFT_4020 at 229.967 kb on - strand, within EX28DRAFT_4020 at 230.105 kb on + strand, within EX28DRAFT_4020
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 228,364 - +0.3 228,364 - -0.6 228,364 - +0.2 228,409 - -0.6 228,920 + EX28DRAFT_4018 0.54 +1.2 228,921 - EX28DRAFT_4018 0.54 -1.0 228,922 + EX28DRAFT_4018 0.54 -1.9 228,922 + EX28DRAFT_4018 0.54 -2.6 229,145 + -0.2 229,163 - +0.2 229,163 - -0.4 229,163 - +0.3 229,163 - -0.4 229,163 - -1.0 229,234 - -0.2 229,308 + EX28DRAFT_4019 0.19 -1.7 229,308 + EX28DRAFT_4019 0.19 -1.1 229,308 + EX28DRAFT_4019 0.19 -1.2 229,308 + EX28DRAFT_4019 0.19 -1.0 229,308 + EX28DRAFT_4019 0.19 -0.8 229,308 + EX28DRAFT_4019 0.19 -0.7 229,309 - EX28DRAFT_4019 0.20 -0.4 229,309 - EX28DRAFT_4019 0.20 +2.0 229,312 + EX28DRAFT_4019 0.20 -0.6 229,312 + EX28DRAFT_4019 0.20 -0.9 229,313 - EX28DRAFT_4019 0.20 -1.1 229,313 - EX28DRAFT_4019 0.20 -0.8 229,351 - EX28DRAFT_4019 0.29 +0.2 229,354 - EX28DRAFT_4019 0.29 -0.3 229,380 - EX28DRAFT_4019 0.35 -0.6 229,380 - EX28DRAFT_4019 0.35 -0.8 229,383 - EX28DRAFT_4019 0.36 -0.0 229,803 - -1.0 229,823 + -1.3 229,823 + +0.4 229,823 + -0.1 229,823 + +0.1 229,824 - +0.0 229,824 - +0.1 229,827 + -0.7 229,827 + +0.1 229,827 + -1.5 229,842 - -0.2 229,842 - -0.8 229,873 - -0.1 229,966 + EX28DRAFT_4020 0.14 +0.0 229,967 - EX28DRAFT_4020 0.14 +1.1 230,105 + EX28DRAFT_4020 0.28 +0.2
Or see this region's nucleotide sequence