Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3673 and EX28DRAFT_3674 are separated by 1 nucleotides EX28DRAFT_3674 and EX28DRAFT_3675 are separated by 179 nucleotides EX28DRAFT_3675 and EX28DRAFT_3676 are separated by 563 nucleotides
EX28DRAFT_3673: EX28DRAFT_3673 - acetolactate synthase, large subunit (EC 2.2.1.6), at 340,567 to 342,291
_3673
EX28DRAFT_3674: EX28DRAFT_3674 - acetolactate synthase, small subunit (EC 2.2.1.6), at 342,293 to 342,784
_3674
EX28DRAFT_3675: EX28DRAFT_3675 - transcriptional regulator, LacI family, at 342,964 to 343,971
_3675
EX28DRAFT_3676: EX28DRAFT_3676 - mraZ protein, at 344,535 to 345,029
_3676
Position (kb) 342
343
344 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 342.025 kb on - strand, within EX28DRAFT_3673 at 342.031 kb on + strand, within EX28DRAFT_3673 at 342.032 kb on - strand, within EX28DRAFT_3673 at 342.055 kb on + strand, within EX28DRAFT_3673 at 342.055 kb on + strand, within EX28DRAFT_3673 at 342.056 kb on - strand, within EX28DRAFT_3673 at 342.056 kb on - strand, within EX28DRAFT_3673 at 342.098 kb on - strand, within EX28DRAFT_3673 at 342.107 kb on + strand, within EX28DRAFT_3673 at 342.108 kb on - strand, within EX28DRAFT_3673 at 342.108 kb on - strand, within EX28DRAFT_3673 at 342.192 kb on + strand at 342.237 kb on + strand at 342.237 kb on + strand at 342.292 kb on + strand at 342.374 kb on + strand, within EX28DRAFT_3674 at 342.487 kb on + strand, within EX28DRAFT_3674 at 342.487 kb on + strand, within EX28DRAFT_3674 at 342.534 kb on - strand, within EX28DRAFT_3674 at 342.650 kb on + strand, within EX28DRAFT_3674 at 342.651 kb on - strand, within EX28DRAFT_3674 at 342.651 kb on - strand, within EX28DRAFT_3674 at 342.783 kb on - strand at 342.863 kb on - strand at 342.895 kb on + strand at 343.018 kb on + strand at 343.019 kb on - strand at 343.098 kb on + strand, within EX28DRAFT_3675 at 343.098 kb on + strand, within EX28DRAFT_3675 at 343.099 kb on - strand, within EX28DRAFT_3675 at 343.099 kb on - strand, within EX28DRAFT_3675 at 343.099 kb on - strand, within EX28DRAFT_3675 at 343.102 kb on + strand, within EX28DRAFT_3675 at 343.102 kb on + strand, within EX28DRAFT_3675 at 343.152 kb on + strand, within EX28DRAFT_3675 at 343.190 kb on - strand, within EX28DRAFT_3675 at 343.604 kb on - strand, within EX28DRAFT_3675 at 343.604 kb on - strand, within EX28DRAFT_3675 at 343.609 kb on + strand, within EX28DRAFT_3675 at 343.609 kb on + strand, within EX28DRAFT_3675 at 343.609 kb on + strand, within EX28DRAFT_3675 at 343.617 kb on + strand, within EX28DRAFT_3675 at 343.618 kb on - strand, within EX28DRAFT_3675 at 343.622 kb on - strand, within EX28DRAFT_3675 at 343.622 kb on - strand, within EX28DRAFT_3675 at 343.749 kb on + strand, within EX28DRAFT_3675 at 344.025 kb on - strand at 344.042 kb on + strand at 344.043 kb on - strand at 344.064 kb on + strand at 344.065 kb on - strand at 344.065 kb on - strand at 344.183 kb on - strand at 344.318 kb on - strand at 344.319 kb on + strand at 344.320 kb on - strand at 344.324 kb on - strand at 344.386 kb on + strand at 344.386 kb on + strand at 344.386 kb on + strand at 344.442 kb on - strand at 344.442 kb on - strand at 344.450 kb on - strand at 344.474 kb on + strand at 344.690 kb on + strand, within EX28DRAFT_3676
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 342,025 - EX28DRAFT_3673 0.85 -0.2 342,031 + EX28DRAFT_3673 0.85 -0.2 342,032 - EX28DRAFT_3673 0.85 +0.1 342,055 + EX28DRAFT_3673 0.86 -0.9 342,055 + EX28DRAFT_3673 0.86 +0.3 342,056 - EX28DRAFT_3673 0.86 +0.4 342,056 - EX28DRAFT_3673 0.86 -0.3 342,098 - EX28DRAFT_3673 0.89 +0.8 342,107 + EX28DRAFT_3673 0.89 -0.1 342,108 - EX28DRAFT_3673 0.89 +1.9 342,108 - EX28DRAFT_3673 0.89 -0.3 342,192 + +0.2 342,237 + +0.0 342,237 + +0.1 342,292 + -0.7 342,374 + EX28DRAFT_3674 0.16 +0.2 342,487 + EX28DRAFT_3674 0.39 -0.6 342,487 + EX28DRAFT_3674 0.39 +1.0 342,534 - EX28DRAFT_3674 0.49 -0.5 342,650 + EX28DRAFT_3674 0.73 -0.7 342,651 - EX28DRAFT_3674 0.73 -0.0 342,651 - EX28DRAFT_3674 0.73 +0.3 342,783 - -0.4 342,863 - +0.9 342,895 + -0.0 343,018 + -2.2 343,019 - -1.8 343,098 + EX28DRAFT_3675 0.13 -2.2 343,098 + EX28DRAFT_3675 0.13 -1.2 343,099 - EX28DRAFT_3675 0.13 -2.7 343,099 - EX28DRAFT_3675 0.13 -2.1 343,099 - EX28DRAFT_3675 0.13 -2.0 343,102 + EX28DRAFT_3675 0.14 -3.7 343,102 + EX28DRAFT_3675 0.14 -2.5 343,152 + EX28DRAFT_3675 0.19 -2.0 343,190 - EX28DRAFT_3675 0.22 -1.2 343,604 - EX28DRAFT_3675 0.63 -3.7 343,604 - EX28DRAFT_3675 0.63 -1.9 343,609 + EX28DRAFT_3675 0.64 -2.7 343,609 + EX28DRAFT_3675 0.64 -1.8 343,609 + EX28DRAFT_3675 0.64 -1.1 343,617 + EX28DRAFT_3675 0.65 -4.3 343,618 - EX28DRAFT_3675 0.65 +0.5 343,622 - EX28DRAFT_3675 0.65 -2.5 343,622 - EX28DRAFT_3675 0.65 -3.6 343,749 + EX28DRAFT_3675 0.78 -3.1 344,025 - +0.8 344,042 + +0.2 344,043 - -0.0 344,064 + -1.0 344,065 - -0.7 344,065 - -1.2 344,183 - +0.1 344,318 - -0.4 344,319 + -0.1 344,320 - -0.4 344,324 - +0.2 344,386 + +0.0 344,386 + +0.2 344,386 + +0.1 344,442 - -0.7 344,442 - +0.5 344,450 - -0.7 344,474 + -0.1 344,690 + EX28DRAFT_3676 0.31 -0.4
Or see this region's nucleotide sequence