Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3612 and EX28DRAFT_3613 are separated by 218 nucleotides EX28DRAFT_3613 and EX28DRAFT_3614 are separated by 24 nucleotides
EX28DRAFT_3612: EX28DRAFT_3612 - RNA methyltransferase, TrmH family, group 1, at 271,320 to 272,006
_3612
EX28DRAFT_3613: EX28DRAFT_3613 - RNA, at 272,225 to 272,342
_3613
EX28DRAFT_3614: EX28DRAFT_3614 - aspartate kinase (EC 2.7.2.4), at 272,367 to 274,829
_3614
Position (kb) 272
273 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 271.365 kb on - strand at 271.412 kb on - strand, within EX28DRAFT_3612 at 271.412 kb on - strand, within EX28DRAFT_3612 at 271.581 kb on + strand, within EX28DRAFT_3612 at 271.581 kb on + strand, within EX28DRAFT_3612 at 271.751 kb on - strand, within EX28DRAFT_3612 at 271.751 kb on - strand, within EX28DRAFT_3612 at 271.770 kb on + strand, within EX28DRAFT_3612 at 271.770 kb on + strand, within EX28DRAFT_3612 at 271.771 kb on - strand, within EX28DRAFT_3612 at 271.783 kb on + strand, within EX28DRAFT_3612 at 271.793 kb on - strand, within EX28DRAFT_3612 at 271.793 kb on - strand, within EX28DRAFT_3612 at 271.795 kb on + strand, within EX28DRAFT_3612 at 271.796 kb on - strand, within EX28DRAFT_3612 at 271.874 kb on - strand, within EX28DRAFT_3612 at 271.874 kb on - strand, within EX28DRAFT_3612 at 272.146 kb on + strand at 272.192 kb on + strand at 272.193 kb on - strand at 272.206 kb on + strand at 272.244 kb on + strand, within EX28DRAFT_3613 at 272.245 kb on - strand, within EX28DRAFT_3613 at 272.247 kb on + strand, within EX28DRAFT_3613 at 272.247 kb on + strand, within EX28DRAFT_3613 at 272.247 kb on + strand, within EX28DRAFT_3613 at 272.248 kb on - strand, within EX28DRAFT_3613 at 272.271 kb on + strand, within EX28DRAFT_3613 at 272.320 kb on + strand, within EX28DRAFT_3613 at 272.321 kb on - strand, within EX28DRAFT_3613 at 272.321 kb on - strand, within EX28DRAFT_3613 at 272.360 kb on + strand at 272.391 kb on - strand at 272.574 kb on - strand at 272.757 kb on - strand, within EX28DRAFT_3614 at 272.845 kb on - strand, within EX28DRAFT_3614 at 273.040 kb on + strand, within EX28DRAFT_3614 at 273.064 kb on - strand, within EX28DRAFT_3614 at 273.064 kb on - strand, within EX28DRAFT_3614 at 273.142 kb on - strand, within EX28DRAFT_3614
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 271,365 - -0.9 271,412 - EX28DRAFT_3612 0.13 -0.2 271,412 - EX28DRAFT_3612 0.13 +0.1 271,581 + EX28DRAFT_3612 0.38 -1.1 271,581 + EX28DRAFT_3612 0.38 -0.5 271,751 - EX28DRAFT_3612 0.63 -0.2 271,751 - EX28DRAFT_3612 0.63 +0.3 271,770 + EX28DRAFT_3612 0.66 -0.5 271,770 + EX28DRAFT_3612 0.66 -0.3 271,771 - EX28DRAFT_3612 0.66 -0.2 271,783 + EX28DRAFT_3612 0.67 +0.7 271,793 - EX28DRAFT_3612 0.69 +0.0 271,793 - EX28DRAFT_3612 0.69 -0.0 271,795 + EX28DRAFT_3612 0.69 +0.3 271,796 - EX28DRAFT_3612 0.69 +0.3 271,874 - EX28DRAFT_3612 0.81 +0.6 271,874 - EX28DRAFT_3612 0.81 +0.8 272,146 + +0.2 272,192 + -1.1 272,193 - -1.1 272,206 + +0.2 272,244 + EX28DRAFT_3613 0.16 -2.0 272,245 - EX28DRAFT_3613 0.17 -0.7 272,247 + EX28DRAFT_3613 0.19 -1.6 272,247 + EX28DRAFT_3613 0.19 -3.6 272,247 + EX28DRAFT_3613 0.19 -1.7 272,248 - EX28DRAFT_3613 0.19 +0.3 272,271 + EX28DRAFT_3613 0.39 -2.4 272,320 + EX28DRAFT_3613 0.81 +2.4 272,321 - EX28DRAFT_3613 0.81 -2.8 272,321 - EX28DRAFT_3613 0.81 -2.3 272,360 + +1.9 272,391 - -2.2 272,574 - -1.0 272,757 - EX28DRAFT_3614 0.16 -1.8 272,845 - EX28DRAFT_3614 0.19 -0.1 273,040 + EX28DRAFT_3614 0.27 -1.4 273,064 - EX28DRAFT_3614 0.28 -2.5 273,064 - EX28DRAFT_3614 0.28 -3.3 273,142 - EX28DRAFT_3614 0.31 -2.4
Or see this region's nucleotide sequence