Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3493 and EX28DRAFT_3494 are separated by 185 nucleotides EX28DRAFT_3494 and EX28DRAFT_3495 are separated by 50 nucleotides
EX28DRAFT_3493: EX28DRAFT_3493 - Transcriptional regulators, at 155,691 to 156,698
_3493
EX28DRAFT_3494: EX28DRAFT_3494 - Sugar-binding cellulase-like, at 156,884 to 157,972
_3494
EX28DRAFT_3495: EX28DRAFT_3495 - sugar (Glycoside-Pentoside-Hexuronide) transporter, at 158,023 to 159,417
_3495
Position (kb) 156
157
158 Strain fitness (log2 ratio) -1
0
1 at 156.832 kb on + strand at 156.833 kb on - strand at 156.833 kb on - strand at 156.923 kb on + strand at 156.952 kb on + strand at 156.953 kb on - strand at 156.953 kb on - strand at 156.953 kb on - strand at 156.956 kb on + strand at 157.218 kb on - strand, within EX28DRAFT_3494 at 157.328 kb on + strand, within EX28DRAFT_3494 at 157.328 kb on + strand, within EX28DRAFT_3494 at 157.329 kb on - strand, within EX28DRAFT_3494 at 157.389 kb on - strand, within EX28DRAFT_3494 at 157.930 kb on - strand at 157.970 kb on + strand at 157.973 kb on + strand at 157.973 kb on + strand at 157.974 kb on - strand at 157.976 kb on + strand at 158.016 kb on + strand at 158.016 kb on + strand at 158.017 kb on - strand at 158.017 kb on - strand at 158.017 kb on - strand at 158.018 kb on + strand at 158.018 kb on + strand at 158.018 kb on + strand at 158.018 kb on + strand at 158.018 kb on + strand at 158.018 kb on + strand at 158.019 kb on - strand at 158.019 kb on - strand at 158.019 kb on - strand at 158.095 kb on - strand at 158.118 kb on + strand at 158.119 kb on - strand at 158.122 kb on - strand at 158.125 kb on + strand at 158.126 kb on - strand at 158.131 kb on + strand at 158.323 kb on - strand, within EX28DRAFT_3495 at 158.371 kb on + strand, within EX28DRAFT_3495 at 158.371 kb on + strand, within EX28DRAFT_3495 at 158.371 kb on + strand, within EX28DRAFT_3495 at 158.371 kb on + strand, within EX28DRAFT_3495 at 158.371 kb on + strand, within EX28DRAFT_3495 at 158.371 kb on + strand, within EX28DRAFT_3495 at 158.371 kb on + strand, within EX28DRAFT_3495 at 158.371 kb on + strand, within EX28DRAFT_3495 at 158.371 kb on + strand, within EX28DRAFT_3495 at 158.372 kb on - strand, within EX28DRAFT_3495 at 158.392 kb on + strand, within EX28DRAFT_3495 at 158.392 kb on + strand, within EX28DRAFT_3495 at 158.552 kb on - strand, within EX28DRAFT_3495 at 158.569 kb on + strand, within EX28DRAFT_3495 at 158.575 kb on - strand, within EX28DRAFT_3495 at 158.575 kb on - strand, within EX28DRAFT_3495 at 158.628 kb on + strand, within EX28DRAFT_3495 at 158.779 kb on - strand, within EX28DRAFT_3495 at 158.907 kb on + strand, within EX28DRAFT_3495 at 158.908 kb on - strand, within EX28DRAFT_3495 at 158.908 kb on - strand, within EX28DRAFT_3495
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 156,832 + -0.4 156,833 - +0.6 156,833 - +0.1 156,923 + +0.4 156,952 + -0.3 156,953 - -0.4 156,953 - +0.1 156,953 - +0.4 156,956 + +0.1 157,218 - EX28DRAFT_3494 0.31 -0.4 157,328 + EX28DRAFT_3494 0.41 -0.8 157,328 + EX28DRAFT_3494 0.41 -0.9 157,329 - EX28DRAFT_3494 0.41 -0.3 157,389 - EX28DRAFT_3494 0.46 -0.1 157,930 - +1.1 157,970 + -0.4 157,973 + +0.1 157,973 + -0.1 157,974 - +0.3 157,976 + +0.1 158,016 + +0.2 158,016 + -0.3 158,017 - +0.0 158,017 - -1.3 158,017 - +0.6 158,018 + -0.4 158,018 + -0.6 158,018 + +0.1 158,018 + -0.1 158,018 + +0.3 158,018 + +0.3 158,019 - -0.4 158,019 - +0.2 158,019 - -0.0 158,095 - +0.3 158,118 + -1.4 158,119 - +1.5 158,122 - +0.3 158,125 + -0.1 158,126 - -0.2 158,131 + -0.1 158,323 - EX28DRAFT_3495 0.22 +0.8 158,371 + EX28DRAFT_3495 0.25 +0.3 158,371 + EX28DRAFT_3495 0.25 +0.1 158,371 + EX28DRAFT_3495 0.25 +0.1 158,371 + EX28DRAFT_3495 0.25 -0.2 158,371 + EX28DRAFT_3495 0.25 +0.2 158,371 + EX28DRAFT_3495 0.25 +0.1 158,371 + EX28DRAFT_3495 0.25 +0.4 158,371 + EX28DRAFT_3495 0.25 -0.1 158,371 + EX28DRAFT_3495 0.25 -0.2 158,372 - EX28DRAFT_3495 0.25 -0.4 158,392 + EX28DRAFT_3495 0.26 -0.7 158,392 + EX28DRAFT_3495 0.26 +0.1 158,552 - EX28DRAFT_3495 0.38 +0.2 158,569 + EX28DRAFT_3495 0.39 -0.0 158,575 - EX28DRAFT_3495 0.40 +0.2 158,575 - EX28DRAFT_3495 0.40 +0.7 158,628 + EX28DRAFT_3495 0.43 +0.0 158,779 - EX28DRAFT_3495 0.54 +0.0 158,907 + EX28DRAFT_3495 0.63 +1.6 158,908 - EX28DRAFT_3495 0.63 +0.8 158,908 - EX28DRAFT_3495 0.63 +0.5
Or see this region's nucleotide sequence