Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3342 and EX28DRAFT_3343 are separated by 40 nucleotides EX28DRAFT_3343 and EX28DRAFT_3344 are separated by 58 nucleotides EX28DRAFT_3344 and EX28DRAFT_3345 are separated by 108 nucleotides EX28DRAFT_3345 and EX28DRAFT_3346 are separated by 37 nucleotides
EX28DRAFT_3342: EX28DRAFT_3342 - EF-P beta-lysylation protein EpmB, at 12,696 to 13,724
_3342
EX28DRAFT_3343: EX28DRAFT_3343 - translation elongation factor P, at 13,765 to 14,331
_3343
EX28DRAFT_3344: EX28DRAFT_3344 - Predicted small secreted protein, at 14,390 to 14,521
_3344
EX28DRAFT_3345: EX28DRAFT_3345 - Predicted small secreted protein, at 14,630 to 14,776
_3345
EX28DRAFT_3346: EX28DRAFT_3346 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 14,814 to 15,413
_3346
Position (kb) 14
15 Strain fitness (log2 ratio) -1
0
1
2 at 14.479 kb on + strand, within EX28DRAFT_3344 at 14.480 kb on - strand, within EX28DRAFT_3344 at 14.497 kb on + strand, within EX28DRAFT_3344 at 14.497 kb on + strand, within EX28DRAFT_3344 at 14.519 kb on + strand at 14.594 kb on + strand at 14.595 kb on - strand at 14.615 kb on + strand at 14.616 kb on - strand at 14.626 kb on + strand at 14.629 kb on + strand at 14.629 kb on + strand at 14.630 kb on - strand at 14.630 kb on - strand at 14.630 kb on - strand at 14.630 kb on - strand at 14.695 kb on + strand, within EX28DRAFT_3345 at 14.698 kb on + strand, within EX28DRAFT_3345 at 14.761 kb on + strand, within EX28DRAFT_3345 at 14.774 kb on + strand at 14.775 kb on - strand at 14.778 kb on + strand at 14.783 kb on + strand at 14.784 kb on - strand at 14.784 kb on - strand at 14.784 kb on - strand at 14.785 kb on - strand at 14.893 kb on + strand, within EX28DRAFT_3346 at 14.893 kb on + strand, within EX28DRAFT_3346 at 14.893 kb on + strand, within EX28DRAFT_3346 at 14.894 kb on - strand, within EX28DRAFT_3346 at 14.897 kb on + strand, within EX28DRAFT_3346 at 14.897 kb on + strand, within EX28DRAFT_3346 at 14.897 kb on + strand, within EX28DRAFT_3346 at 14.898 kb on - strand, within EX28DRAFT_3346 at 14.898 kb on - strand, within EX28DRAFT_3346 at 14.898 kb on - strand, within EX28DRAFT_3346 at 14.898 kb on - strand, within EX28DRAFT_3346 at 14.899 kb on + strand, within EX28DRAFT_3346 at 14.900 kb on - strand, within EX28DRAFT_3346 at 14.900 kb on - strand, within EX28DRAFT_3346 at 15.222 kb on - strand, within EX28DRAFT_3346 at 15.322 kb on + strand, within EX28DRAFT_3346 at 15.322 kb on + strand, within EX28DRAFT_3346 at 15.413 kb on + strand at 15.471 kb on + strand at 15.471 kb on + strand at 15.492 kb on - strand at 15.492 kb on - strand at 15.514 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 14,479 + EX28DRAFT_3344 0.67 -0.2 14,480 - EX28DRAFT_3344 0.68 +0.9 14,497 + EX28DRAFT_3344 0.81 +0.3 14,497 + EX28DRAFT_3344 0.81 +0.0 14,519 + -0.1 14,594 + -1.1 14,595 - +0.4 14,615 + -0.3 14,616 - -0.3 14,626 + +0.1 14,629 + +0.3 14,629 + -0.1 14,630 - -0.4 14,630 - +0.2 14,630 - +0.3 14,630 - +0.7 14,695 + EX28DRAFT_3345 0.44 +0.4 14,698 + EX28DRAFT_3345 0.46 +2.3 14,761 + EX28DRAFT_3345 0.89 +0.0 14,774 + +0.6 14,775 - +0.1 14,778 + -0.7 14,783 + -0.6 14,784 - -0.4 14,784 - -0.1 14,784 - +0.6 14,785 - +1.6 14,893 + EX28DRAFT_3346 0.13 -0.8 14,893 + EX28DRAFT_3346 0.13 -0.7 14,893 + EX28DRAFT_3346 0.13 +0.1 14,894 - EX28DRAFT_3346 0.13 -0.4 14,897 + EX28DRAFT_3346 0.14 -0.5 14,897 + EX28DRAFT_3346 0.14 +1.2 14,897 + EX28DRAFT_3346 0.14 +0.8 14,898 - EX28DRAFT_3346 0.14 +0.0 14,898 - EX28DRAFT_3346 0.14 +0.2 14,898 - EX28DRAFT_3346 0.14 -0.6 14,898 - EX28DRAFT_3346 0.14 +0.3 14,899 + EX28DRAFT_3346 0.14 +1.2 14,900 - EX28DRAFT_3346 0.14 +0.1 14,900 - EX28DRAFT_3346 0.14 -0.4 15,222 - EX28DRAFT_3346 0.68 -0.1 15,322 + EX28DRAFT_3346 0.85 -0.0 15,322 + EX28DRAFT_3346 0.85 +0.9 15,413 + +0.3 15,471 + -1.2 15,471 + -0.3 15,492 - +0.6 15,492 - +0.3 15,514 - -0.6
Or see this region's nucleotide sequence