Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3311 and EX28DRAFT_3312 are separated by 125 nucleotides EX28DRAFT_3312 and EX28DRAFT_3313 are separated by 330 nucleotides
EX28DRAFT_3311: EX28DRAFT_3311 - ribosomal protein L11 methyltransferase, at 611,269 to 612,150
_3311
EX28DRAFT_3312: EX28DRAFT_3312 - Carbonic anhydrase, at 612,276 to 613,019
_3312
EX28DRAFT_3313: EX28DRAFT_3313 - putative TIM-barrel protein, nifR3 family, at 613,350 to 614,315
_3313
Position (kb) 612
613
614 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 611.464 kb on - strand, within EX28DRAFT_3311 at 612.192 kb on + strand at 612.192 kb on + strand at 612.251 kb on + strand at 612.357 kb on + strand, within EX28DRAFT_3312 at 612.358 kb on - strand, within EX28DRAFT_3312 at 612.444 kb on - strand, within EX28DRAFT_3312 at 612.493 kb on - strand, within EX28DRAFT_3312 at 612.530 kb on + strand, within EX28DRAFT_3312 at 612.531 kb on - strand, within EX28DRAFT_3312 at 612.555 kb on - strand, within EX28DRAFT_3312 at 612.572 kb on + strand, within EX28DRAFT_3312 at 612.572 kb on + strand, within EX28DRAFT_3312 at 612.573 kb on - strand, within EX28DRAFT_3312 at 612.582 kb on - strand, within EX28DRAFT_3312 at 612.598 kb on + strand, within EX28DRAFT_3312 at 612.598 kb on + strand, within EX28DRAFT_3312 at 612.599 kb on - strand, within EX28DRAFT_3312 at 612.638 kb on - strand, within EX28DRAFT_3312 at 612.678 kb on - strand, within EX28DRAFT_3312 at 612.745 kb on + strand, within EX28DRAFT_3312 at 612.837 kb on - strand, within EX28DRAFT_3312 at 612.844 kb on - strand, within EX28DRAFT_3312 at 612.904 kb on + strand, within EX28DRAFT_3312 at 612.905 kb on - strand, within EX28DRAFT_3312 at 612.905 kb on - strand, within EX28DRAFT_3312 at 612.908 kb on + strand, within EX28DRAFT_3312 at 612.908 kb on + strand, within EX28DRAFT_3312 at 612.908 kb on + strand, within EX28DRAFT_3312 at 612.971 kb on + strand at 612.972 kb on - strand at 613.161 kb on + strand at 613.254 kb on - strand at 613.308 kb on + strand at 613.310 kb on + strand at 613.331 kb on + strand at 613.406 kb on + strand at 613.409 kb on + strand at 613.628 kb on + strand, within EX28DRAFT_3313 at 613.757 kb on + strand, within EX28DRAFT_3313 at 613.789 kb on + strand, within EX28DRAFT_3313 at 613.957 kb on + strand, within EX28DRAFT_3313 at 613.992 kb on + strand, within EX28DRAFT_3313 at 613.992 kb on + strand, within EX28DRAFT_3313 at 613.994 kb on + strand, within EX28DRAFT_3313
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 611,464 - EX28DRAFT_3311 0.22 +0.6 612,192 + -0.7 612,192 + +0.3 612,251 + -0.0 612,357 + EX28DRAFT_3312 0.11 +0.2 612,358 - EX28DRAFT_3312 0.11 -0.3 612,444 - EX28DRAFT_3312 0.23 -0.6 612,493 - EX28DRAFT_3312 0.29 -0.1 612,530 + EX28DRAFT_3312 0.34 -0.9 612,531 - EX28DRAFT_3312 0.34 -0.5 612,555 - EX28DRAFT_3312 0.38 +0.3 612,572 + EX28DRAFT_3312 0.40 +0.9 612,572 + EX28DRAFT_3312 0.40 -0.7 612,573 - EX28DRAFT_3312 0.40 -0.0 612,582 - EX28DRAFT_3312 0.41 -0.5 612,598 + EX28DRAFT_3312 0.43 -0.1 612,598 + EX28DRAFT_3312 0.43 +0.0 612,599 - EX28DRAFT_3312 0.43 -0.2 612,638 - EX28DRAFT_3312 0.49 +0.0 612,678 - EX28DRAFT_3312 0.54 +0.2 612,745 + EX28DRAFT_3312 0.63 -0.4 612,837 - EX28DRAFT_3312 0.75 -1.1 612,844 - EX28DRAFT_3312 0.76 -1.3 612,904 + EX28DRAFT_3312 0.84 -0.2 612,905 - EX28DRAFT_3312 0.85 +0.3 612,905 - EX28DRAFT_3312 0.85 +0.3 612,908 + EX28DRAFT_3312 0.85 +0.7 612,908 + EX28DRAFT_3312 0.85 -2.6 612,908 + EX28DRAFT_3312 0.85 +0.2 612,971 + +0.0 612,972 - -0.5 613,161 + +0.6 613,254 - -2.8 613,308 + +2.0 613,310 + -1.5 613,331 + -0.3 613,406 + +0.7 613,409 + +0.1 613,628 + EX28DRAFT_3313 0.29 +0.2 613,757 + EX28DRAFT_3313 0.42 +0.2 613,789 + EX28DRAFT_3313 0.45 -0.9 613,957 + EX28DRAFT_3313 0.63 +0.2 613,992 + EX28DRAFT_3313 0.66 -1.1 613,992 + EX28DRAFT_3313 0.66 +0.1 613,994 + EX28DRAFT_3313 0.67 -0.2
Or see this region's nucleotide sequence