Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3213 and EX28DRAFT_3214 are separated by 62 nucleotides EX28DRAFT_3214 and EX28DRAFT_3215 are separated by 16 nucleotides EX28DRAFT_3215 and EX28DRAFT_3216 overlap by 57 nucleotides EX28DRAFT_3216 and EX28DRAFT_3217 are separated by 96 nucleotides
EX28DRAFT_3213: EX28DRAFT_3213 - polyribonucleotide nucleotidyltransferase, at 512,940 to 515,078
_3213
EX28DRAFT_3214: EX28DRAFT_3214 - RNA, at 515,141 to 515,304
_3214
EX28DRAFT_3215: EX28DRAFT_3215 - ribosomal protein S15, bacterial/organelle, at 515,321 to 515,590
_3215
EX28DRAFT_3216: EX28DRAFT_3216 - RNA, at 515,534 to 515,648
_3216
EX28DRAFT_3217: EX28DRAFT_3217 - tRNA pseudouridine(55) synthase, at 515,745 to 516,695
_3217
Position (kb) 515
516 Strain fitness (log2 ratio) -2
-1
0
1 at 515.232 kb on - strand, within EX28DRAFT_3214 at 515.248 kb on - strand, within EX28DRAFT_3214 at 515.854 kb on - strand, within EX28DRAFT_3217 at 516.027 kb on + strand, within EX28DRAFT_3217 at 516.028 kb on - strand, within EX28DRAFT_3217 at 516.101 kb on - strand, within EX28DRAFT_3217 at 516.101 kb on - strand, within EX28DRAFT_3217 at 516.101 kb on - strand, within EX28DRAFT_3217 at 516.160 kb on + strand, within EX28DRAFT_3217 at 516.160 kb on + strand, within EX28DRAFT_3217 at 516.160 kb on + strand, within EX28DRAFT_3217 at 516.161 kb on - strand, within EX28DRAFT_3217 at 516.161 kb on - strand, within EX28DRAFT_3217 at 516.161 kb on - strand, within EX28DRAFT_3217 at 516.181 kb on - strand, within EX28DRAFT_3217 at 516.230 kb on - strand, within EX28DRAFT_3217 at 516.230 kb on - strand, within EX28DRAFT_3217 at 516.281 kb on - strand, within EX28DRAFT_3217
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 515,232 - EX28DRAFT_3214 0.55 +0.9 515,248 - EX28DRAFT_3214 0.65 +0.4 515,854 - EX28DRAFT_3217 0.11 +0.5 516,027 + EX28DRAFT_3217 0.30 -0.6 516,028 - EX28DRAFT_3217 0.30 -0.3 516,101 - EX28DRAFT_3217 0.37 -0.4 516,101 - EX28DRAFT_3217 0.37 -0.3 516,101 - EX28DRAFT_3217 0.37 -0.1 516,160 + EX28DRAFT_3217 0.44 +0.0 516,160 + EX28DRAFT_3217 0.44 -0.0 516,160 + EX28DRAFT_3217 0.44 -0.1 516,161 - EX28DRAFT_3217 0.44 +1.1 516,161 - EX28DRAFT_3217 0.44 +0.8 516,161 - EX28DRAFT_3217 0.44 +0.0 516,181 - EX28DRAFT_3217 0.46 -0.7 516,230 - EX28DRAFT_3217 0.51 -1.8 516,230 - EX28DRAFT_3217 0.51 +0.1 516,281 - EX28DRAFT_3217 0.56 -0.8
Or see this region's nucleotide sequence