Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_3079

Experiment: MS_media with arsenate 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_3078 and EX28DRAFT_3079 are separated by 376 nucleotidesEX28DRAFT_3079 and EX28DRAFT_3080 are separated by 76 nucleotides EX28DRAFT_3078: EX28DRAFT_3078 - 3,4-dihydroxy-2-butanone 4-phosphate synthase, at 388,452 to 389,105 _3078 EX28DRAFT_3079: EX28DRAFT_3079 - Uncharacterized protein conserved in bacteria, at 389,482 to 389,778 _3079 EX28DRAFT_3080: EX28DRAFT_3080 - rfaE bifunctional protein, domain I/rfaE bifunctional protein, domain II, at 389,855 to 391,285 _3080 Position (kb) 389 390Strain fitness (log2 ratio) -2 -1 0 1at 389.129 kb on - strandat 389.372 kb on - strandat 389.372 kb on - strandat 389.372 kb on - strandat 389.372 kb on - strandat 389.402 kb on + strandat 389.403 kb on - strandat 389.403 kb on - strandat 389.455 kb on - strandat 389.532 kb on + strand, within EX28DRAFT_3079at 389.776 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM
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389,129 - -0.2
389,372 - -0.0
389,372 - +0.6
389,372 - -0.0
389,372 - -0.8
389,402 + +0.2
389,403 - +0.2
389,403 - +0.3
389,455 - +1.1
389,532 + EX28DRAFT_3079 0.17 -1.5
389,776 + -2.5

Or see this region's nucleotide sequence