Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2961 and EX28DRAFT_2962 are separated by 168 nucleotides EX28DRAFT_2962 and EX28DRAFT_2963 are separated by 41 nucleotides EX28DRAFT_2963 and EX28DRAFT_2964 are separated by 24 nucleotides EX28DRAFT_2964 and EX28DRAFT_2965 are separated by 109 nucleotides
EX28DRAFT_2961: EX28DRAFT_2961 - yecA family protein, at 272,575 to 273,153
_2961
EX28DRAFT_2962: EX28DRAFT_2962 - Uncharacterized protein conserved in bacteria, at 273,322 to 273,651
_2962
EX28DRAFT_2963: EX28DRAFT_2963 - RNA, at 273,693 to 273,876
_2963
EX28DRAFT_2964: EX28DRAFT_2964 - 5,10-methenyltetrahydrofolate synthetase, at 273,901 to 274,497
_2964
EX28DRAFT_2965: EX28DRAFT_2965 - Phosphoglycerate dehydrogenase and related dehydrogenases, at 274,607 to 275,839
_2965
Position (kb) 273
274
275 Strain fitness (log2 ratio) -2
-1
0
1 at 273.125 kb on + strand at 273.147 kb on + strand at 273.148 kb on - strand at 273.189 kb on - strand at 273.189 kb on - strand at 273.231 kb on + strand at 273.231 kb on + strand at 273.248 kb on - strand at 273.251 kb on + strand at 273.251 kb on + strand at 273.251 kb on + strand at 273.251 kb on + strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.252 kb on - strand at 273.253 kb on + strand at 273.253 kb on + strand at 273.254 kb on - strand at 273.285 kb on - strand at 273.508 kb on + strand, within EX28DRAFT_2962 at 273.509 kb on - strand, within EX28DRAFT_2962 at 273.545 kb on - strand, within EX28DRAFT_2962 at 273.590 kb on + strand, within EX28DRAFT_2962 at 273.591 kb on - strand, within EX28DRAFT_2962 at 273.591 kb on - strand, within EX28DRAFT_2962 at 273.668 kb on - strand at 273.668 kb on - strand at 273.672 kb on + strand at 273.672 kb on + strand at 273.673 kb on - strand at 273.677 kb on + strand at 273.678 kb on - strand at 273.736 kb on + strand, within EX28DRAFT_2963 at 273.737 kb on - strand, within EX28DRAFT_2963 at 273.803 kb on - strand, within EX28DRAFT_2963 at 273.808 kb on + strand, within EX28DRAFT_2963 at 273.809 kb on - strand, within EX28DRAFT_2963 at 274.138 kb on + strand, within EX28DRAFT_2964 at 274.190 kb on - strand, within EX28DRAFT_2964 at 274.290 kb on + strand, within EX28DRAFT_2964 at 274.290 kb on + strand, within EX28DRAFT_2964 at 274.500 kb on + strand at 274.501 kb on - strand at 274.557 kb on + strand at 274.559 kb on + strand at 274.560 kb on - strand at 274.581 kb on - strand at 274.595 kb on - strand at 274.595 kb on - strand at 274.612 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 273,125 + -0.5 273,147 + -2.2 273,148 - -0.7 273,189 - -0.1 273,189 - -0.6 273,231 + -0.4 273,231 + -0.8 273,248 - +0.6 273,251 + -0.2 273,251 + -0.3 273,251 + -0.1 273,251 + -1.1 273,252 - +0.2 273,252 - +0.8 273,252 - +0.4 273,252 - +0.7 273,252 - -0.1 273,252 - -0.1 273,253 + +0.4 273,253 + +0.5 273,254 - +0.1 273,285 - -0.5 273,508 + EX28DRAFT_2962 0.56 -0.1 273,509 - EX28DRAFT_2962 0.57 +0.3 273,545 - EX28DRAFT_2962 0.68 +0.4 273,590 + EX28DRAFT_2962 0.81 +0.8 273,591 - EX28DRAFT_2962 0.82 -0.6 273,591 - EX28DRAFT_2962 0.82 +0.3 273,668 - +0.3 273,668 - +0.3 273,672 + -2.3 273,672 + +0.2 273,673 - -0.5 273,677 + +0.2 273,678 - +0.2 273,736 + EX28DRAFT_2963 0.23 -0.1 273,737 - EX28DRAFT_2963 0.24 -0.3 273,803 - EX28DRAFT_2963 0.60 -1.1 273,808 + EX28DRAFT_2963 0.62 +0.1 273,809 - EX28DRAFT_2963 0.63 -0.3 274,138 + EX28DRAFT_2964 0.40 -0.5 274,190 - EX28DRAFT_2964 0.48 -0.6 274,290 + EX28DRAFT_2964 0.65 -2.5 274,290 + EX28DRAFT_2964 0.65 -1.1 274,500 + +0.1 274,501 - -0.6 274,557 + +0.6 274,559 + +0.4 274,560 - +0.1 274,581 - -0.1 274,595 - -0.4 274,595 - -0.4 274,612 - +0.2
Or see this region's nucleotide sequence