Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2958

Experiment: MS_media with arsenate 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2957 and EX28DRAFT_2958 are separated by 397 nucleotidesEX28DRAFT_2958 and EX28DRAFT_2959 are separated by 12 nucleotides EX28DRAFT_2957: EX28DRAFT_2957 - glycine cleavage system T protein, at 267,348 to 268,442 _2957 EX28DRAFT_2958: EX28DRAFT_2958 - Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family, at 268,840 to 270,042 _2958 EX28DRAFT_2959: EX28DRAFT_2959 - 2-polyprenyl-6-methoxyphenol 4-hydroxylase, at 270,055 to 271,233 _2959 Position (kb) 268 269 270 271Strain fitness (log2 ratio) -2 -1 0 1at 267.878 kb on - strand, within EX28DRAFT_2957at 268.048 kb on + strand, within EX28DRAFT_2957at 268.136 kb on - strand, within EX28DRAFT_2957at 268.976 kb on - strand, within EX28DRAFT_2958at 269.810 kb on + strand, within EX28DRAFT_2958

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM
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267,878 - EX28DRAFT_2957 0.48 +0.3
268,048 + EX28DRAFT_2957 0.64 -1.1
268,136 - EX28DRAFT_2957 0.72 +0.4
268,976 - EX28DRAFT_2958 0.11 -2.4
269,810 + EX28DRAFT_2958 0.81 -2.2

Or see this region's nucleotide sequence