Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2915 and EX28DRAFT_2916 overlap by 31 nucleotides EX28DRAFT_2916 and EX28DRAFT_2917 are separated by 121 nucleotides
EX28DRAFT_2915: EX28DRAFT_2915 - Transcriptional regulators, at 225,394 to 226,431
_2915
EX28DRAFT_2916: EX28DRAFT_2916 - diaminopimelate decarboxylase, at 226,401 to 227,663
_2916
EX28DRAFT_2917: EX28DRAFT_2917 - Transcriptional regulator, at 227,785 to 228,711
_2917
Position (kb) 226
227
228 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 225.486 kb on + strand at 225.610 kb on + strand, within EX28DRAFT_2915 at 225.611 kb on - strand, within EX28DRAFT_2915 at 225.758 kb on - strand, within EX28DRAFT_2915 at 225.767 kb on - strand, within EX28DRAFT_2915 at 225.904 kb on + strand, within EX28DRAFT_2915 at 225.905 kb on - strand, within EX28DRAFT_2915 at 225.940 kb on - strand, within EX28DRAFT_2915 at 225.993 kb on + strand, within EX28DRAFT_2915 at 226.069 kb on + strand, within EX28DRAFT_2915 at 226.076 kb on + strand, within EX28DRAFT_2915 at 226.076 kb on + strand, within EX28DRAFT_2915 at 226.077 kb on - strand, within EX28DRAFT_2915 at 226.195 kb on - strand, within EX28DRAFT_2915 at 226.261 kb on + strand, within EX28DRAFT_2915 at 226.278 kb on + strand, within EX28DRAFT_2915 at 226.279 kb on - strand, within EX28DRAFT_2915 at 226.279 kb on - strand, within EX28DRAFT_2915 at 226.279 kb on - strand, within EX28DRAFT_2915 at 226.394 kb on - strand at 226.508 kb on - strand at 226.508 kb on - strand at 226.512 kb on - strand at 226.558 kb on + strand, within EX28DRAFT_2916 at 226.713 kb on - strand, within EX28DRAFT_2916 at 226.723 kb on + strand, within EX28DRAFT_2916 at 226.732 kb on + strand, within EX28DRAFT_2916 at 227.072 kb on - strand, within EX28DRAFT_2916 at 227.096 kb on + strand, within EX28DRAFT_2916 at 227.131 kb on - strand, within EX28DRAFT_2916 at 227.153 kb on + strand, within EX28DRAFT_2916 at 227.154 kb on - strand, within EX28DRAFT_2916 at 227.154 kb on - strand, within EX28DRAFT_2916 at 227.288 kb on + strand, within EX28DRAFT_2916 at 227.289 kb on - strand, within EX28DRAFT_2916 at 227.292 kb on + strand, within EX28DRAFT_2916 at 227.293 kb on - strand, within EX28DRAFT_2916 at 227.484 kb on - strand, within EX28DRAFT_2916 at 227.678 kb on - strand at 227.764 kb on + strand at 227.871 kb on + strand at 227.871 kb on + strand at 227.871 kb on + strand at 228.365 kb on - strand, within EX28DRAFT_2917 at 228.391 kb on + strand, within EX28DRAFT_2917 at 228.412 kb on + strand, within EX28DRAFT_2917 at 228.413 kb on + strand, within EX28DRAFT_2917 at 228.568 kb on - strand, within EX28DRAFT_2917
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 225,486 + -0.3 225,610 + EX28DRAFT_2915 0.21 -0.1 225,611 - EX28DRAFT_2915 0.21 -0.0 225,758 - EX28DRAFT_2915 0.35 +0.2 225,767 - EX28DRAFT_2915 0.36 +0.3 225,904 + EX28DRAFT_2915 0.49 -0.5 225,905 - EX28DRAFT_2915 0.49 -0.2 225,940 - EX28DRAFT_2915 0.53 -0.2 225,993 + EX28DRAFT_2915 0.58 +0.7 226,069 + EX28DRAFT_2915 0.65 +0.0 226,076 + EX28DRAFT_2915 0.66 +0.0 226,076 + EX28DRAFT_2915 0.66 -0.3 226,077 - EX28DRAFT_2915 0.66 -0.0 226,195 - EX28DRAFT_2915 0.77 -1.2 226,261 + EX28DRAFT_2915 0.84 -0.6 226,278 + EX28DRAFT_2915 0.85 -0.3 226,279 - EX28DRAFT_2915 0.85 -2.1 226,279 - EX28DRAFT_2915 0.85 -0.5 226,279 - EX28DRAFT_2915 0.85 +0.6 226,394 - -0.0 226,508 - -1.6 226,508 - -0.4 226,512 - +2.0 226,558 + EX28DRAFT_2916 0.12 -3.2 226,713 - EX28DRAFT_2916 0.25 -4.7 226,723 + EX28DRAFT_2916 0.25 -0.6 226,732 + EX28DRAFT_2916 0.26 -1.7 227,072 - EX28DRAFT_2916 0.53 -3.0 227,096 + EX28DRAFT_2916 0.55 -2.7 227,131 - EX28DRAFT_2916 0.58 -3.3 227,153 + EX28DRAFT_2916 0.60 -3.8 227,154 - EX28DRAFT_2916 0.60 -1.3 227,154 - EX28DRAFT_2916 0.60 -3.7 227,288 + EX28DRAFT_2916 0.70 -1.6 227,289 - EX28DRAFT_2916 0.70 -4.0 227,292 + EX28DRAFT_2916 0.71 -0.6 227,293 - EX28DRAFT_2916 0.71 -4.1 227,484 - EX28DRAFT_2916 0.86 -2.5 227,678 - +0.8 227,764 + -0.4 227,871 + -3.6 227,871 + -4.0 227,871 + -0.1 228,365 - EX28DRAFT_2917 0.63 -3.8 228,391 + EX28DRAFT_2917 0.65 -3.3 228,412 + EX28DRAFT_2917 0.68 -1.1 228,413 + EX28DRAFT_2917 0.68 -2.2 228,568 - EX28DRAFT_2917 0.84 -2.5
Or see this region's nucleotide sequence