Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2847 and EX28DRAFT_2848 are separated by 9 nucleotides EX28DRAFT_2848 and EX28DRAFT_2849 are separated by 9 nucleotides
EX28DRAFT_2847: EX28DRAFT_2847 - sulfate adenylyltransferase, large subunit, at 147,145 to 148,569
_2847
EX28DRAFT_2848: EX28DRAFT_2848 - sulfate adenylyltransferase, small subunit, at 148,579 to 149,487
_2848
EX28DRAFT_2849: EX28DRAFT_2849 - uroporphyrin-III C-methyltransferase, at 149,497 to 150,855
_2849
Position (kb) 148
149
150 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 147.619 kb on - strand, within EX28DRAFT_2847 at 147.619 kb on - strand, within EX28DRAFT_2847 at 147.748 kb on + strand, within EX28DRAFT_2847 at 147.749 kb on - strand, within EX28DRAFT_2847 at 147.815 kb on + strand, within EX28DRAFT_2847 at 147.816 kb on - strand, within EX28DRAFT_2847 at 147.902 kb on + strand, within EX28DRAFT_2847 at 147.902 kb on + strand, within EX28DRAFT_2847 at 147.902 kb on + strand, within EX28DRAFT_2847 at 147.961 kb on + strand, within EX28DRAFT_2847 at 147.962 kb on - strand, within EX28DRAFT_2847 at 147.972 kb on + strand, within EX28DRAFT_2847 at 148.035 kb on + strand, within EX28DRAFT_2847 at 148.111 kb on - strand, within EX28DRAFT_2847 at 148.111 kb on - strand, within EX28DRAFT_2847 at 148.243 kb on - strand, within EX28DRAFT_2847 at 148.518 kb on - strand at 148.557 kb on + strand at 148.558 kb on - strand at 148.893 kb on - strand, within EX28DRAFT_2848 at 148.893 kb on - strand, within EX28DRAFT_2848 at 148.976 kb on + strand, within EX28DRAFT_2848 at 149.047 kb on - strand, within EX28DRAFT_2848 at 149.047 kb on - strand, within EX28DRAFT_2848 at 149.047 kb on - strand, within EX28DRAFT_2848 at 149.047 kb on - strand, within EX28DRAFT_2848 at 149.218 kb on - strand, within EX28DRAFT_2848 at 149.241 kb on - strand, within EX28DRAFT_2848 at 149.271 kb on - strand, within EX28DRAFT_2848 at 149.387 kb on + strand, within EX28DRAFT_2848 at 149.387 kb on + strand, within EX28DRAFT_2848 at 149.387 kb on + strand, within EX28DRAFT_2848 at 149.388 kb on - strand, within EX28DRAFT_2848 at 149.388 kb on - strand, within EX28DRAFT_2848 at 149.388 kb on - strand, within EX28DRAFT_2848 at 149.388 kb on - strand, within EX28DRAFT_2848 at 149.388 kb on - strand, within EX28DRAFT_2848 at 149.440 kb on - strand at 149.469 kb on + strand at 149.470 kb on - strand at 149.470 kb on - strand at 149.771 kb on + strand, within EX28DRAFT_2849 at 149.771 kb on + strand, within EX28DRAFT_2849 at 149.772 kb on - strand, within EX28DRAFT_2849 at 149.837 kb on + strand, within EX28DRAFT_2849 at 149.838 kb on - strand, within EX28DRAFT_2849
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 147,619 - EX28DRAFT_2847 0.33 -0.1 147,619 - EX28DRAFT_2847 0.33 -0.7 147,748 + EX28DRAFT_2847 0.42 -1.0 147,749 - EX28DRAFT_2847 0.42 -1.2 147,815 + EX28DRAFT_2847 0.47 -1.2 147,816 - EX28DRAFT_2847 0.47 -1.8 147,902 + EX28DRAFT_2847 0.53 -1.4 147,902 + EX28DRAFT_2847 0.53 -0.1 147,902 + EX28DRAFT_2847 0.53 -1.1 147,961 + EX28DRAFT_2847 0.57 -2.9 147,962 - EX28DRAFT_2847 0.57 +0.4 147,972 + EX28DRAFT_2847 0.58 -1.4 148,035 + EX28DRAFT_2847 0.62 -1.2 148,111 - EX28DRAFT_2847 0.68 -0.9 148,111 - EX28DRAFT_2847 0.68 -3.3 148,243 - EX28DRAFT_2847 0.77 -2.4 148,518 - -0.8 148,557 + -2.1 148,558 - -0.9 148,893 - EX28DRAFT_2848 0.35 -2.0 148,893 - EX28DRAFT_2848 0.35 -1.8 148,976 + EX28DRAFT_2848 0.44 -3.3 149,047 - EX28DRAFT_2848 0.51 -1.5 149,047 - EX28DRAFT_2848 0.51 -2.8 149,047 - EX28DRAFT_2848 0.51 -2.3 149,047 - EX28DRAFT_2848 0.51 -0.2 149,218 - EX28DRAFT_2848 0.70 -3.6 149,241 - EX28DRAFT_2848 0.73 -2.0 149,271 - EX28DRAFT_2848 0.76 -0.8 149,387 + EX28DRAFT_2848 0.89 -1.8 149,387 + EX28DRAFT_2848 0.89 -1.1 149,387 + EX28DRAFT_2848 0.89 -1.4 149,388 - EX28DRAFT_2848 0.89 -1.6 149,388 - EX28DRAFT_2848 0.89 -0.9 149,388 - EX28DRAFT_2848 0.89 -0.4 149,388 - EX28DRAFT_2848 0.89 -1.3 149,388 - EX28DRAFT_2848 0.89 -1.6 149,440 - -1.9 149,469 + -0.9 149,470 - -1.7 149,470 - -2.4 149,771 + EX28DRAFT_2849 0.20 -2.4 149,771 + EX28DRAFT_2849 0.20 -2.1 149,772 - EX28DRAFT_2849 0.20 +2.0 149,837 + EX28DRAFT_2849 0.25 -1.3 149,838 - EX28DRAFT_2849 0.25 +0.1
Or see this region's nucleotide sequence