Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2720 and EX28DRAFT_2721 are separated by 103 nucleotides EX28DRAFT_2721 and EX28DRAFT_2722 overlap by 11 nucleotides EX28DRAFT_2722 and EX28DRAFT_2723 are separated by 156 nucleotides EX28DRAFT_2723 and EX28DRAFT_2724 are separated by 89 nucleotides EX28DRAFT_2724 and EX28DRAFT_2725 are separated by 416 nucleotides
EX28DRAFT_2720: EX28DRAFT_2720 - Small protein A (tmRNA-binding), at 25,159 to 25,497
_2720
EX28DRAFT_2721: EX28DRAFT_2721 - Uncharacterized protein conserved in bacteria, at 25,601 to 25,888
_2721
EX28DRAFT_2722: EX28DRAFT_2722 - Oligoketide cyclase/lipid transport protein, at 25,878 to 26,315
_2722
EX28DRAFT_2723: EX28DRAFT_2723 - SsrA-binding protein, at 26,472 to 26,954
_2723
EX28DRAFT_2724: EX28DRAFT_2724 - RNA, at 27,044 to 27,407
_2724
EX28DRAFT_2725: EX28DRAFT_2725 - hypothetical protein, at 27,824 to 28,180
_2725
Position (kb) 26
27 Strain fitness (log2 ratio) -2
-1
0
1 at 25.495 kb on + strand at 25.496 kb on - strand at 25.602 kb on + strand at 25.602 kb on + strand at 25.603 kb on - strand at 25.606 kb on + strand at 25.837 kb on - strand, within EX28DRAFT_2721 at 25.858 kb on - strand, within EX28DRAFT_2721 at 25.863 kb on - strand at 25.863 kb on - strand at 25.868 kb on + strand at 25.868 kb on + strand at 25.891 kb on + strand at 26.350 kb on - strand at 26.356 kb on + strand at 26.356 kb on + strand at 26.357 kb on - strand at 26.394 kb on + strand at 26.399 kb on + strand at 26.472 kb on - strand at 26.634 kb on + strand, within EX28DRAFT_2723 at 26.634 kb on + strand, within EX28DRAFT_2723 at 26.710 kb on - strand, within EX28DRAFT_2723 at 27.025 kb on + strand at 27.025 kb on + strand at 27.026 kb on - strand at 27.164 kb on + strand, within EX28DRAFT_2724 at 27.344 kb on + strand, within EX28DRAFT_2724 at 27.344 kb on + strand, within EX28DRAFT_2724 at 27.618 kb on + strand at 27.618 kb on + strand at 27.619 kb on - strand at 27.619 kb on - strand at 27.638 kb on + strand at 27.638 kb on + strand at 27.638 kb on + strand at 27.639 kb on - strand at 27.639 kb on - strand at 27.729 kb on + strand at 27.810 kb on + strand at 27.811 kb on - strand at 27.821 kb on - strand at 27.823 kb on + strand at 27.824 kb on - strand at 27.838 kb on + strand at 27.839 kb on - strand at 27.846 kb on + strand at 27.847 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 25,495 + +0.5 25,496 - -0.1 25,602 + -1.0 25,602 + -0.6 25,603 - +0.1 25,606 + +0.4 25,837 - EX28DRAFT_2721 0.82 +0.3 25,858 - EX28DRAFT_2721 0.89 -0.8 25,863 - -0.9 25,863 - +0.0 25,868 + -0.7 25,868 + -1.3 25,891 + -1.0 26,350 - -0.4 26,356 + -0.4 26,356 + -0.5 26,357 - -0.2 26,394 + -0.2 26,399 + -1.2 26,472 - -0.9 26,634 + EX28DRAFT_2723 0.34 +0.1 26,634 + EX28DRAFT_2723 0.34 -1.8 26,710 - EX28DRAFT_2723 0.49 -2.7 27,025 + -0.4 27,025 + -0.3 27,026 - -0.7 27,164 + EX28DRAFT_2724 0.33 -1.0 27,344 + EX28DRAFT_2724 0.82 -0.9 27,344 + EX28DRAFT_2724 0.82 -0.0 27,618 + +0.0 27,618 + -0.1 27,619 - -0.6 27,619 - +0.4 27,638 + -0.4 27,638 + -0.6 27,638 + -0.5 27,639 - -0.5 27,639 - +0.4 27,729 + +0.8 27,810 + +0.5 27,811 - -0.4 27,821 - +0.4 27,823 + -0.6 27,824 - +0.2 27,838 + +1.0 27,839 - +0.9 27,846 + +0.3 27,847 - -0.6
Or see this region's nucleotide sequence