Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2654 and EX28DRAFT_2655 are separated by 106 nucleotides EX28DRAFT_2655 and EX28DRAFT_2656 are separated by 260 nucleotides
EX28DRAFT_2654: EX28DRAFT_2654 - Alpha/beta hydrolase of unknown function (DUF1100), at 2,691,388 to 2,692,632
_2654
EX28DRAFT_2655: EX28DRAFT_2655 - Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins, at 2,692,739 to 2,693,197
_2655
EX28DRAFT_2656: EX28DRAFT_2656 - Xaa-His dipeptidase, at 2,693,458 to 2,694,915
_2656
Position (kb)
2692
2693
2694 Strain fitness (log2 ratio)
-1
0
1 at 2691.780 kb on + strand, within EX28DRAFT_2654 at 2691.781 kb on - strand, within EX28DRAFT_2654 at 2691.782 kb on + strand, within EX28DRAFT_2654 at 2691.783 kb on - strand, within EX28DRAFT_2654 at 2691.993 kb on - strand, within EX28DRAFT_2654 at 2692.002 kb on - strand, within EX28DRAFT_2654 at 2692.004 kb on + strand, within EX28DRAFT_2654 at 2692.074 kb on + strand, within EX28DRAFT_2654 at 2692.658 kb on - strand at 2692.666 kb on + strand at 2692.666 kb on + strand at 2692.666 kb on + strand at 2692.686 kb on + strand at 2693.011 kb on - strand, within EX28DRAFT_2655 at 2693.011 kb on - strand, within EX28DRAFT_2655 at 2693.011 kb on - strand, within EX28DRAFT_2655 at 2693.011 kb on - strand, within EX28DRAFT_2655 at 2693.101 kb on + strand, within EX28DRAFT_2655 at 2693.185 kb on - strand at 2693.220 kb on + strand at 2693.252 kb on - strand at 2693.329 kb on + strand at 2693.329 kb on + strand at 2693.330 kb on - strand at 2693.330 kb on - strand at 2693.330 kb on - strand at 2693.356 kb on + strand at 2693.395 kb on + strand at 2693.396 kb on - strand at 2693.396 kb on - strand at 2693.454 kb on + strand at 2693.455 kb on - strand at 2693.455 kb on - strand at 2693.562 kb on + strand at 2693.562 kb on + strand at 2693.563 kb on - strand at 2693.563 kb on - strand at 2693.565 kb on + strand at 2693.566 kb on - strand at 2693.753 kb on - strand, within EX28DRAFT_2656 at 2693.785 kb on - strand, within EX28DRAFT_2656
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,691,780 + EX28DRAFT_2654 0.31 -0.8 2,691,781 - EX28DRAFT_2654 0.32 -0.6 2,691,782 + EX28DRAFT_2654 0.32 -0.9 2,691,783 - EX28DRAFT_2654 0.32 -0.5 2,691,993 - EX28DRAFT_2654 0.49 -1.5 2,692,002 - EX28DRAFT_2654 0.49 -0.6 2,692,004 + EX28DRAFT_2654 0.49 -0.6 2,692,074 + EX28DRAFT_2654 0.55 -0.2 2,692,658 - +0.3 2,692,666 + -0.1 2,692,666 + -1.3 2,692,666 + +0.3 2,692,686 + +0.2 2,693,011 - EX28DRAFT_2655 0.59 +1.3 2,693,011 - EX28DRAFT_2655 0.59 +0.6 2,693,011 - EX28DRAFT_2655 0.59 +0.5 2,693,011 - EX28DRAFT_2655 0.59 +0.5 2,693,101 + EX28DRAFT_2655 0.79 -0.1 2,693,185 - -0.2 2,693,220 + +0.5 2,693,252 - -0.8 2,693,329 + +0.5 2,693,329 + +0.6 2,693,330 - +0.6 2,693,330 - +0.2 2,693,330 - -0.2 2,693,356 + -0.5 2,693,395 + -0.9 2,693,396 - +0.9 2,693,396 - -0.5 2,693,454 + -0.1 2,693,455 - -0.6 2,693,455 - -0.5 2,693,562 + +0.1 2,693,562 + -0.2 2,693,563 - -0.1 2,693,563 - +0.1 2,693,565 + +0.1 2,693,566 - -0.4 2,693,753 - EX28DRAFT_2656 0.20 +0.2 2,693,785 - EX28DRAFT_2656 0.22 +0.4
Or see this region's nucleotide sequence