Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2648 and EX28DRAFT_2649 are separated by 163 nucleotides EX28DRAFT_2649 and EX28DRAFT_2650 are separated by 111 nucleotides EX28DRAFT_2650 and EX28DRAFT_2651 are separated by 11 nucleotides
EX28DRAFT_2648: EX28DRAFT_2648 - Integrase, at 2,685,568 to 2,686,743
_2648
EX28DRAFT_2649: EX28DRAFT_2649 - tRNA, at 2,686,907 to 2,686,982
_2649
EX28DRAFT_2650: EX28DRAFT_2650 - glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41), at 2,687,094 to 2,688,347
_2650
EX28DRAFT_2651: EX28DRAFT_2651 - glutamate 5-kinase, at 2,688,359 to 2,689,462
_2651
Position (kb)
2687
2688
2689 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2686.109 kb on - strand, within EX28DRAFT_2648 at 2686.150 kb on + strand, within EX28DRAFT_2648 at 2686.168 kb on + strand, within EX28DRAFT_2648 at 2686.315 kb on + strand, within EX28DRAFT_2648 at 2686.340 kb on - strand, within EX28DRAFT_2648 at 2686.340 kb on - strand, within EX28DRAFT_2648 at 2686.344 kb on - strand, within EX28DRAFT_2648 at 2686.654 kb on + strand at 2686.654 kb on + strand at 2686.656 kb on + strand at 2686.656 kb on + strand at 2686.690 kb on - strand at 2686.691 kb on + strand at 2686.699 kb on - strand at 2686.776 kb on - strand at 2686.777 kb on + strand at 2686.778 kb on - strand at 2686.974 kb on + strand, within EX28DRAFT_2649 at 2686.974 kb on + strand, within EX28DRAFT_2649 at 2686.974 kb on + strand, within EX28DRAFT_2649 at 2686.975 kb on - strand at 2687.024 kb on + strand at 2687.030 kb on + strand at 2687.031 kb on - strand at 2687.092 kb on - strand at 2687.108 kb on + strand at 2687.134 kb on + strand at 2687.436 kb on + strand, within EX28DRAFT_2650 at 2687.580 kb on + strand, within EX28DRAFT_2650 at 2687.588 kb on + strand, within EX28DRAFT_2650 at 2687.625 kb on - strand, within EX28DRAFT_2650 at 2687.771 kb on - strand, within EX28DRAFT_2650 at 2687.829 kb on + strand, within EX28DRAFT_2650 at 2687.928 kb on - strand, within EX28DRAFT_2650 at 2687.992 kb on + strand, within EX28DRAFT_2650 at 2687.992 kb on + strand, within EX28DRAFT_2650 at 2687.992 kb on + strand, within EX28DRAFT_2650 at 2687.993 kb on - strand, within EX28DRAFT_2650 at 2688.403 kb on - strand at 2688.483 kb on - strand, within EX28DRAFT_2651 at 2689.182 kb on + strand, within EX28DRAFT_2651 at 2689.182 kb on + strand, within EX28DRAFT_2651 at 2689.183 kb on - strand, within EX28DRAFT_2651 at 2689.331 kb on - strand, within EX28DRAFT_2651 at 2689.331 kb on - strand, within EX28DRAFT_2651 at 2689.331 kb on - strand, within EX28DRAFT_2651
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,686,109 - EX28DRAFT_2648 0.46 +0.4 2,686,150 + EX28DRAFT_2648 0.49 -0.3 2,686,168 + EX28DRAFT_2648 0.51 -1.0 2,686,315 + EX28DRAFT_2648 0.64 +0.2 2,686,340 - EX28DRAFT_2648 0.66 -0.1 2,686,340 - EX28DRAFT_2648 0.66 -0.5 2,686,344 - EX28DRAFT_2648 0.66 -0.4 2,686,654 + -0.1 2,686,654 + -2.0 2,686,656 + +0.6 2,686,656 + +0.2 2,686,690 - -1.6 2,686,691 + +0.1 2,686,699 - +1.9 2,686,776 - +0.3 2,686,777 + +0.1 2,686,778 - -0.4 2,686,974 + EX28DRAFT_2649 0.88 +0.1 2,686,974 + EX28DRAFT_2649 0.88 +0.9 2,686,974 + EX28DRAFT_2649 0.88 +0.1 2,686,975 - -0.1 2,687,024 + +0.3 2,687,030 + -0.2 2,687,031 - -0.4 2,687,092 - -0.1 2,687,108 + -1.7 2,687,134 + +0.3 2,687,436 + EX28DRAFT_2650 0.27 -1.4 2,687,580 + EX28DRAFT_2650 0.39 -1.2 2,687,588 + EX28DRAFT_2650 0.39 -3.0 2,687,625 - EX28DRAFT_2650 0.42 -1.7 2,687,771 - EX28DRAFT_2650 0.54 -1.3 2,687,829 + EX28DRAFT_2650 0.59 -2.8 2,687,928 - EX28DRAFT_2650 0.67 +1.9 2,687,992 + EX28DRAFT_2650 0.72 -3.7 2,687,992 + EX28DRAFT_2650 0.72 -0.9 2,687,992 + EX28DRAFT_2650 0.72 -0.0 2,687,993 - EX28DRAFT_2650 0.72 +0.1 2,688,403 - -2.2 2,688,483 - EX28DRAFT_2651 0.11 -2.0 2,689,182 + EX28DRAFT_2651 0.75 -1.3 2,689,182 + EX28DRAFT_2651 0.75 -0.9 2,689,183 - EX28DRAFT_2651 0.75 -1.3 2,689,331 - EX28DRAFT_2651 0.88 -1.7 2,689,331 - EX28DRAFT_2651 0.88 -2.3 2,689,331 - EX28DRAFT_2651 0.88 -3.3
Or see this region's nucleotide sequence