Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2518 and EX28DRAFT_2519 are separated by 35 nucleotides EX28DRAFT_2519 and EX28DRAFT_2520 are separated by 221 nucleotides
EX28DRAFT_2518: EX28DRAFT_2518 - ammonium transporter, at 2,547,819 to 2,549,108
_2518
EX28DRAFT_2519: EX28DRAFT_2519 - nitrogen regulatory protein P-II family, at 2,549,144 to 2,549,482
_2519
EX28DRAFT_2520: EX28DRAFT_2520 - ABC-type multidrug transport system, ATPase and permease components, at 2,549,704 to 2,551,485
_2520
Position (kb)
2549
2550 Strain fitness (log2 ratio)
-2
-1
0
1 at 2548.415 kb on - strand, within EX28DRAFT_2518 at 2548.539 kb on + strand, within EX28DRAFT_2518 at 2548.539 kb on + strand, within EX28DRAFT_2518 at 2548.621 kb on + strand, within EX28DRAFT_2518 at 2548.621 kb on + strand, within EX28DRAFT_2518 at 2548.674 kb on - strand, within EX28DRAFT_2518 at 2548.712 kb on + strand, within EX28DRAFT_2518 at 2548.747 kb on + strand, within EX28DRAFT_2518 at 2548.753 kb on + strand, within EX28DRAFT_2518 at 2549.101 kb on - strand at 2549.101 kb on - strand at 2549.323 kb on + strand, within EX28DRAFT_2519 at 2549.324 kb on - strand, within EX28DRAFT_2519 at 2549.462 kb on + strand at 2549.462 kb on + strand at 2549.463 kb on - strand at 2549.482 kb on + strand at 2549.483 kb on - strand at 2549.483 kb on - strand at 2549.533 kb on - strand at 2549.771 kb on + strand at 2550.084 kb on + strand, within EX28DRAFT_2520 at 2550.085 kb on - strand, within EX28DRAFT_2520 at 2550.349 kb on - strand, within EX28DRAFT_2520
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,548,415 - EX28DRAFT_2518 0.46 +0.5 2,548,539 + EX28DRAFT_2518 0.56 +0.5 2,548,539 + EX28DRAFT_2518 0.56 -0.2 2,548,621 + EX28DRAFT_2518 0.62 -1.3 2,548,621 + EX28DRAFT_2518 0.62 -0.6 2,548,674 - EX28DRAFT_2518 0.66 +0.1 2,548,712 + EX28DRAFT_2518 0.69 -1.9 2,548,747 + EX28DRAFT_2518 0.72 -0.4 2,548,753 + EX28DRAFT_2518 0.72 -0.9 2,549,101 - -0.4 2,549,101 - -0.6 2,549,323 + EX28DRAFT_2519 0.53 +0.3 2,549,324 - EX28DRAFT_2519 0.53 +1.5 2,549,462 + -0.3 2,549,462 + -0.5 2,549,463 - +0.9 2,549,482 + +0.5 2,549,483 - +0.0 2,549,483 - -0.8 2,549,533 - -1.1 2,549,771 + +0.1 2,550,084 + EX28DRAFT_2520 0.21 -0.2 2,550,085 - EX28DRAFT_2520 0.21 -1.5 2,550,349 - EX28DRAFT_2520 0.36 -0.8
Or see this region's nucleotide sequence