Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2264 and EX28DRAFT_2265 are separated by 83 nucleotides EX28DRAFT_2265 and EX28DRAFT_2266 are separated by 14 nucleotides
EX28DRAFT_2264: EX28DRAFT_2264 - succinyl-CoA synthetase, beta subunit, at 2,286,194 to 2,287,360
_2264
EX28DRAFT_2265: EX28DRAFT_2265 - 2-oxoglutarate dehydrogenase E2 component (EC 2.3.1.61), at 2,287,444 to 2,288,664
_2265
EX28DRAFT_2266: EX28DRAFT_2266 - 2-oxoglutarate dehydrogenase, E1 component, at 2,288,679 to 2,291,486
_2266
Position (kb)
2287
2288
2289 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2286.495 kb on - strand, within EX28DRAFT_2264 at 2286.495 kb on - strand, within EX28DRAFT_2264 at 2286.577 kb on + strand, within EX28DRAFT_2264 at 2286.607 kb on - strand, within EX28DRAFT_2264 at 2287.012 kb on + strand, within EX28DRAFT_2264 at 2287.171 kb on + strand, within EX28DRAFT_2264 at 2287.225 kb on + strand, within EX28DRAFT_2264 at 2287.225 kb on + strand, within EX28DRAFT_2264 at 2287.225 kb on + strand, within EX28DRAFT_2264 at 2287.225 kb on + strand, within EX28DRAFT_2264 at 2287.226 kb on - strand, within EX28DRAFT_2264 at 2287.226 kb on - strand, within EX28DRAFT_2264 at 2287.282 kb on + strand at 2287.283 kb on - strand at 2287.285 kb on + strand at 2287.367 kb on + strand at 2287.390 kb on - strand at 2287.419 kb on + strand at 2287.751 kb on - strand, within EX28DRAFT_2265 at 2287.950 kb on - strand, within EX28DRAFT_2265 at 2288.739 kb on - strand at 2288.739 kb on - strand at 2288.741 kb on - strand at 2288.741 kb on - strand at 2288.884 kb on - strand at 2288.894 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,286,495 - EX28DRAFT_2264 0.26 +0.7 2,286,495 - EX28DRAFT_2264 0.26 -0.5 2,286,577 + EX28DRAFT_2264 0.33 -1.9 2,286,607 - EX28DRAFT_2264 0.35 -0.0 2,287,012 + EX28DRAFT_2264 0.70 -0.4 2,287,171 + EX28DRAFT_2264 0.84 -0.1 2,287,225 + EX28DRAFT_2264 0.88 -0.5 2,287,225 + EX28DRAFT_2264 0.88 +0.2 2,287,225 + EX28DRAFT_2264 0.88 -0.8 2,287,225 + EX28DRAFT_2264 0.88 +0.1 2,287,226 - EX28DRAFT_2264 0.88 +0.7 2,287,226 - EX28DRAFT_2264 0.88 -2.3 2,287,282 + +0.0 2,287,283 - +0.1 2,287,285 + +0.6 2,287,367 + -2.5 2,287,390 - -0.1 2,287,419 + +1.2 2,287,751 - EX28DRAFT_2265 0.25 -2.3 2,287,950 - EX28DRAFT_2265 0.41 +0.3 2,288,739 - -0.9 2,288,739 - -4.1 2,288,741 - -0.4 2,288,741 - -1.3 2,288,884 - -1.1 2,288,894 - +1.9
Or see this region's nucleotide sequence