Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2248 and EX28DRAFT_2249 are separated by 161 nucleotides EX28DRAFT_2249 and EX28DRAFT_2250 are separated by 9 nucleotides EX28DRAFT_2250 and EX28DRAFT_2251 are separated by 35 nucleotides
EX28DRAFT_2248: EX28DRAFT_2248 - tRNA, at 2,269,951 to 2,270,026
_2248
EX28DRAFT_2249: EX28DRAFT_2249 - tol-pal system protein YbgF, at 2,270,188 to 2,270,982
_2249
EX28DRAFT_2250: EX28DRAFT_2250 - peptidoglycan-associated lipoprotein, at 2,270,992 to 2,271,513
_2250
EX28DRAFT_2251: EX28DRAFT_2251 - tol-pal system beta propeller repeat protein TolB, at 2,271,549 to 2,272,841
_2251
Position (kb)
2270
2271
2272 Strain fitness (log2 ratio)
-2
-1
0
1 at 2270.128 kb on + strand at 2270.128 kb on + strand at 2270.137 kb on - strand at 2270.255 kb on - strand at 2270.315 kb on - strand, within EX28DRAFT_2249 at 2270.315 kb on - strand, within EX28DRAFT_2249 at 2270.401 kb on - strand, within EX28DRAFT_2249 at 2270.411 kb on + strand, within EX28DRAFT_2249 at 2270.411 kb on + strand, within EX28DRAFT_2249 at 2270.411 kb on + strand, within EX28DRAFT_2249 at 2270.412 kb on - strand, within EX28DRAFT_2249 at 2270.412 kb on - strand, within EX28DRAFT_2249 at 2270.412 kb on - strand, within EX28DRAFT_2249 at 2270.432 kb on + strand, within EX28DRAFT_2249 at 2270.450 kb on + strand, within EX28DRAFT_2249 at 2270.466 kb on - strand, within EX28DRAFT_2249 at 2270.546 kb on + strand, within EX28DRAFT_2249 at 2270.573 kb on - strand, within EX28DRAFT_2249 at 2270.686 kb on - strand, within EX28DRAFT_2249 at 2270.689 kb on + strand, within EX28DRAFT_2249 at 2270.689 kb on + strand, within EX28DRAFT_2249 at 2270.690 kb on - strand, within EX28DRAFT_2249 at 2270.690 kb on - strand, within EX28DRAFT_2249 at 2270.816 kb on - strand, within EX28DRAFT_2249 at 2270.889 kb on + strand, within EX28DRAFT_2249 at 2270.889 kb on + strand, within EX28DRAFT_2249 at 2270.973 kb on + strand at 2270.974 kb on - strand at 2270.993 kb on + strand at 2270.993 kb on + strand at 2270.996 kb on + strand at 2271.049 kb on + strand, within EX28DRAFT_2250 at 2271.120 kb on - strand, within EX28DRAFT_2250 at 2271.544 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,270,128 + -0.6 2,270,128 + -0.8 2,270,137 - -0.4 2,270,255 - +0.1 2,270,315 - EX28DRAFT_2249 0.16 +0.2 2,270,315 - EX28DRAFT_2249 0.16 +0.9 2,270,401 - EX28DRAFT_2249 0.27 -0.1 2,270,411 + EX28DRAFT_2249 0.28 -2.1 2,270,411 + EX28DRAFT_2249 0.28 -0.6 2,270,411 + EX28DRAFT_2249 0.28 -0.2 2,270,412 - EX28DRAFT_2249 0.28 -0.7 2,270,412 - EX28DRAFT_2249 0.28 -0.0 2,270,412 - EX28DRAFT_2249 0.28 -0.1 2,270,432 + EX28DRAFT_2249 0.31 +0.7 2,270,450 + EX28DRAFT_2249 0.33 +0.2 2,270,466 - EX28DRAFT_2249 0.35 -0.1 2,270,546 + EX28DRAFT_2249 0.45 -0.1 2,270,573 - EX28DRAFT_2249 0.48 -0.5 2,270,686 - EX28DRAFT_2249 0.63 +1.0 2,270,689 + EX28DRAFT_2249 0.63 +0.1 2,270,689 + EX28DRAFT_2249 0.63 -0.9 2,270,690 - EX28DRAFT_2249 0.63 -0.1 2,270,690 - EX28DRAFT_2249 0.63 -0.1 2,270,816 - EX28DRAFT_2249 0.79 +0.4 2,270,889 + EX28DRAFT_2249 0.88 -0.2 2,270,889 + EX28DRAFT_2249 0.88 +0.2 2,270,973 + -0.3 2,270,974 - -0.3 2,270,993 + +0.3 2,270,993 + -1.0 2,270,996 + -1.6 2,271,049 + EX28DRAFT_2250 0.11 +0.3 2,271,120 - EX28DRAFT_2250 0.25 -1.9 2,271,544 - +0.0
Or see this region's nucleotide sequence