Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1932 and EX28DRAFT_1933 are separated by 44 nucleotides EX28DRAFT_1933 and EX28DRAFT_1934 overlap by 4 nucleotides
EX28DRAFT_1932: EX28DRAFT_1932 - Mg/Co/Ni transporter MgtE (contains CBS domain), at 1,938,230 to 1,939,231
_1932
EX28DRAFT_1933: EX28DRAFT_1933 - amidase, hydantoinase/carbamoylase family, at 1,939,276 to 1,940,514
_1933
EX28DRAFT_1934: EX28DRAFT_1934 - Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase, at 1,940,511 to 1,941,752
_1934
Position (kb)
1939
1940
1941 Strain fitness (log2 ratio)
-1
0
1 at 1938.288 kb on - strand at 1938.767 kb on + strand, within EX28DRAFT_1932 at 1938.832 kb on + strand, within EX28DRAFT_1932 at 1939.189 kb on + strand at 1939.211 kb on + strand at 1939.213 kb on + strand at 1939.213 kb on + strand at 1939.214 kb on - strand at 1939.214 kb on - strand at 1939.278 kb on - strand at 1939.773 kb on + strand, within EX28DRAFT_1933 at 1939.774 kb on - strand, within EX28DRAFT_1933 at 1939.777 kb on - strand, within EX28DRAFT_1933 at 1939.777 kb on - strand, within EX28DRAFT_1933 at 1940.429 kb on + strand at 1940.588 kb on - strand at 1940.984 kb on - strand, within EX28DRAFT_1934 at 1940.984 kb on - strand, within EX28DRAFT_1934 at 1940.984 kb on - strand, within EX28DRAFT_1934 at 1941.019 kb on + strand, within EX28DRAFT_1934 at 1941.019 kb on + strand, within EX28DRAFT_1934 at 1941.020 kb on - strand, within EX28DRAFT_1934 at 1941.020 kb on - strand, within EX28DRAFT_1934 at 1941.020 kb on - strand, within EX28DRAFT_1934 at 1941.350 kb on + strand, within EX28DRAFT_1934 at 1941.407 kb on + strand, within EX28DRAFT_1934 at 1941.408 kb on - strand, within EX28DRAFT_1934 at 1941.485 kb on + strand, within EX28DRAFT_1934 at 1941.485 kb on + strand, within EX28DRAFT_1934
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,938,288 - +0.8 1,938,767 + EX28DRAFT_1932 0.54 -0.0 1,938,832 + EX28DRAFT_1932 0.60 -0.1 1,939,189 + +0.2 1,939,211 + +0.6 1,939,213 + +0.6 1,939,213 + -0.1 1,939,214 - -1.0 1,939,214 - +1.2 1,939,278 - -1.7 1,939,773 + EX28DRAFT_1933 0.40 -0.3 1,939,774 - EX28DRAFT_1933 0.40 -0.3 1,939,777 - EX28DRAFT_1933 0.40 -0.1 1,939,777 - EX28DRAFT_1933 0.40 -0.1 1,940,429 + -0.1 1,940,588 - +0.1 1,940,984 - EX28DRAFT_1934 0.38 -0.4 1,940,984 - EX28DRAFT_1934 0.38 +1.7 1,940,984 - EX28DRAFT_1934 0.38 -0.8 1,941,019 + EX28DRAFT_1934 0.41 +0.7 1,941,019 + EX28DRAFT_1934 0.41 -0.5 1,941,020 - EX28DRAFT_1934 0.41 -0.3 1,941,020 - EX28DRAFT_1934 0.41 +0.2 1,941,020 - EX28DRAFT_1934 0.41 -0.0 1,941,350 + EX28DRAFT_1934 0.68 +0.5 1,941,407 + EX28DRAFT_1934 0.72 -0.2 1,941,408 - EX28DRAFT_1934 0.72 -0.2 1,941,485 + EX28DRAFT_1934 0.78 +0.3 1,941,485 + EX28DRAFT_1934 0.78 +0.6
Or see this region's nucleotide sequence