Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1860 and EX28DRAFT_1861 are separated by 93 nucleotides EX28DRAFT_1861 and EX28DRAFT_1862 are separated by 4 nucleotides EX28DRAFT_1862 and EX28DRAFT_1863 are separated by 58 nucleotides
EX28DRAFT_1860: EX28DRAFT_1860 - flagella basal body P-ring formation protein FlgA, at 1,875,381 to 1,876,040
_1860
EX28DRAFT_1861: EX28DRAFT_1861 - anti-sigma-28 factor, FlgM family, at 1,876,134 to 1,876,427
_1861
EX28DRAFT_1862: EX28DRAFT_1862 - Flagellar biosynthesis/type III secretory pathway chaperone, at 1,876,432 to 1,876,857
_1862
EX28DRAFT_1863: EX28DRAFT_1863 - murein biosynthesis integral membrane protein MurJ, at 1,876,916 to 1,878,451
_1863
Position (kb)
1876
1877 Strain fitness (log2 ratio)
-2
-1
0
1 at 1875.497 kb on + strand, within EX28DRAFT_1860 at 1875.636 kb on + strand, within EX28DRAFT_1860 at 1875.640 kb on + strand, within EX28DRAFT_1860 at 1875.641 kb on - strand, within EX28DRAFT_1860 at 1875.641 kb on - strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.669 kb on + strand, within EX28DRAFT_1860 at 1875.670 kb on - strand, within EX28DRAFT_1860 at 1875.670 kb on - strand, within EX28DRAFT_1860 at 1875.912 kb on - strand, within EX28DRAFT_1860 at 1875.912 kb on - strand, within EX28DRAFT_1860 at 1876.022 kb on + strand at 1876.023 kb on - strand at 1876.036 kb on + strand at 1876.036 kb on + strand at 1876.037 kb on - strand at 1876.037 kb on - strand at 1876.037 kb on - strand at 1876.037 kb on - strand at 1876.075 kb on + strand at 1876.133 kb on + strand at 1876.421 kb on + strand at 1876.425 kb on + strand at 1876.426 kb on - strand at 1876.431 kb on + strand at 1876.432 kb on - strand at 1876.452 kb on - strand at 1876.594 kb on + strand, within EX28DRAFT_1862 at 1876.629 kb on + strand, within EX28DRAFT_1862 at 1876.746 kb on + strand, within EX28DRAFT_1862 at 1876.892 kb on + strand at 1876.893 kb on - strand at 1876.893 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,875,497 + EX28DRAFT_1860 0.18 +0.2 1,875,636 + EX28DRAFT_1860 0.39 +0.1 1,875,640 + EX28DRAFT_1860 0.39 -0.4 1,875,641 - EX28DRAFT_1860 0.39 -0.4 1,875,641 - EX28DRAFT_1860 0.39 +0.0 1,875,669 + EX28DRAFT_1860 0.44 +0.1 1,875,669 + EX28DRAFT_1860 0.44 +0.3 1,875,669 + EX28DRAFT_1860 0.44 -0.2 1,875,669 + EX28DRAFT_1860 0.44 +0.2 1,875,669 + EX28DRAFT_1860 0.44 +0.2 1,875,669 + EX28DRAFT_1860 0.44 -0.6 1,875,669 + EX28DRAFT_1860 0.44 +0.2 1,875,670 - EX28DRAFT_1860 0.44 -0.6 1,875,670 - EX28DRAFT_1860 0.44 -0.3 1,875,912 - EX28DRAFT_1860 0.80 -0.3 1,875,912 - EX28DRAFT_1860 0.80 +0.4 1,876,022 + +0.2 1,876,023 - +0.1 1,876,036 + -0.6 1,876,036 + +0.8 1,876,037 - -0.6 1,876,037 - -0.2 1,876,037 - +0.7 1,876,037 - +0.3 1,876,075 + +0.3 1,876,133 + +0.3 1,876,421 + +0.5 1,876,425 + -0.1 1,876,426 - -0.3 1,876,431 + -0.3 1,876,432 - +0.4 1,876,452 - +0.0 1,876,594 + EX28DRAFT_1862 0.38 +0.3 1,876,629 + EX28DRAFT_1862 0.46 +0.2 1,876,746 + EX28DRAFT_1862 0.74 +1.1 1,876,892 + +0.2 1,876,893 - -2.3 1,876,893 - +0.4
Or see this region's nucleotide sequence