Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1727 and EX28DRAFT_1728 are separated by 229 nucleotides EX28DRAFT_1728 and EX28DRAFT_1729 are separated by 106 nucleotides EX28DRAFT_1729 and EX28DRAFT_1730 are separated by 105 nucleotides
EX28DRAFT_1727: EX28DRAFT_1727 - Putative salt-induced outer membrane protein, at 1,742,816 to 1,743,640
_1727
EX28DRAFT_1728: EX28DRAFT_1728 - hexose kinase, 1-phosphofructokinase family, at 1,743,870 to 1,744,802
_1728
EX28DRAFT_1729: EX28DRAFT_1729 - Protein of unknown function (DUF2622), at 1,744,909 to 1,745,199
_1729
EX28DRAFT_1730: EX28DRAFT_1730 - Fructosamine-3-kinase, at 1,745,305 to 1,746,165
_1730
Position (kb)
1743
1744
1745 Strain fitness (log2 ratio)
-1
0
1 at 1742.904 kb on + strand, within EX28DRAFT_1727 at 1742.904 kb on + strand, within EX28DRAFT_1727 at 1743.036 kb on + strand, within EX28DRAFT_1727 at 1743.036 kb on + strand, within EX28DRAFT_1727 at 1743.037 kb on - strand, within EX28DRAFT_1727 at 1743.037 kb on - strand, within EX28DRAFT_1727 at 1743.202 kb on - strand, within EX28DRAFT_1727 at 1743.237 kb on + strand, within EX28DRAFT_1727 at 1743.244 kb on - strand, within EX28DRAFT_1727 at 1743.259 kb on - strand, within EX28DRAFT_1727 at 1743.266 kb on - strand, within EX28DRAFT_1727 at 1743.282 kb on + strand, within EX28DRAFT_1727 at 1743.283 kb on - strand, within EX28DRAFT_1727 at 1743.374 kb on - strand, within EX28DRAFT_1727 at 1743.423 kb on + strand, within EX28DRAFT_1727 at 1743.592 kb on - strand at 1743.687 kb on + strand at 1743.687 kb on + strand at 1743.692 kb on + strand at 1743.692 kb on + strand at 1743.752 kb on - strand at 1743.753 kb on + strand at 1743.754 kb on - strand at 1743.808 kb on + strand at 1743.808 kb on + strand at 1743.855 kb on + strand at 1743.879 kb on - strand at 1743.883 kb on - strand at 1743.883 kb on - strand at 1743.885 kb on - strand at 1744.252 kb on + strand, within EX28DRAFT_1728 at 1744.442 kb on - strand, within EX28DRAFT_1728 at 1744.442 kb on - strand, within EX28DRAFT_1728 at 1744.532 kb on - strand, within EX28DRAFT_1728 at 1744.532 kb on - strand, within EX28DRAFT_1728 at 1744.870 kb on + strand at 1744.876 kb on - strand at 1744.934 kb on - strand at 1745.020 kb on - strand, within EX28DRAFT_1729 at 1745.043 kb on + strand, within EX28DRAFT_1729 at 1745.054 kb on + strand, within EX28DRAFT_1729 at 1745.054 kb on + strand, within EX28DRAFT_1729 at 1745.055 kb on - strand, within EX28DRAFT_1729 at 1745.055 kb on - strand, within EX28DRAFT_1729 at 1745.166 kb on + strand, within EX28DRAFT_1729 at 1745.166 kb on + strand, within EX28DRAFT_1729 at 1745.166 kb on + strand, within EX28DRAFT_1729 at 1745.167 kb on - strand, within EX28DRAFT_1729 at 1745.197 kb on + strand at 1745.198 kb on - strand at 1745.198 kb on - strand at 1745.274 kb on - strand at 1745.330 kb on + strand at 1745.408 kb on + strand, within EX28DRAFT_1730 at 1745.408 kb on + strand, within EX28DRAFT_1730 at 1745.408 kb on + strand, within EX28DRAFT_1730 at 1745.408 kb on + strand, within EX28DRAFT_1730 at 1745.408 kb on + strand, within EX28DRAFT_1730 at 1745.465 kb on + strand, within EX28DRAFT_1730 at 1745.466 kb on - strand, within EX28DRAFT_1730 at 1745.558 kb on - strand, within EX28DRAFT_1730 at 1745.578 kb on + strand, within EX28DRAFT_1730 at 1745.607 kb on + strand, within EX28DRAFT_1730
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,742,904 + EX28DRAFT_1727 0.11 +0.3 1,742,904 + EX28DRAFT_1727 0.11 -0.5 1,743,036 + EX28DRAFT_1727 0.27 -0.1 1,743,036 + EX28DRAFT_1727 0.27 +0.5 1,743,037 - EX28DRAFT_1727 0.27 -0.1 1,743,037 - EX28DRAFT_1727 0.27 -0.1 1,743,202 - EX28DRAFT_1727 0.47 +1.2 1,743,237 + EX28DRAFT_1727 0.51 +0.4 1,743,244 - EX28DRAFT_1727 0.52 -0.2 1,743,259 - EX28DRAFT_1727 0.54 +0.2 1,743,266 - EX28DRAFT_1727 0.55 -0.0 1,743,282 + EX28DRAFT_1727 0.56 -0.7 1,743,283 - EX28DRAFT_1727 0.57 -0.0 1,743,374 - EX28DRAFT_1727 0.68 +0.4 1,743,423 + EX28DRAFT_1727 0.74 -0.6 1,743,592 - +0.3 1,743,687 + -0.1 1,743,687 + -0.8 1,743,692 + -0.2 1,743,692 + -1.1 1,743,752 - -0.6 1,743,753 + +0.3 1,743,754 - +0.2 1,743,808 + -0.3 1,743,808 + +0.4 1,743,855 + +0.3 1,743,879 - -0.9 1,743,883 - +0.4 1,743,883 - +0.2 1,743,885 - +0.2 1,744,252 + EX28DRAFT_1728 0.41 +1.2 1,744,442 - EX28DRAFT_1728 0.61 +0.3 1,744,442 - EX28DRAFT_1728 0.61 +0.4 1,744,532 - EX28DRAFT_1728 0.71 +0.3 1,744,532 - EX28DRAFT_1728 0.71 +0.0 1,744,870 + -0.0 1,744,876 - -0.4 1,744,934 - -1.3 1,745,020 - EX28DRAFT_1729 0.38 -1.0 1,745,043 + EX28DRAFT_1729 0.46 -0.3 1,745,054 + EX28DRAFT_1729 0.50 -0.3 1,745,054 + EX28DRAFT_1729 0.50 -0.5 1,745,055 - EX28DRAFT_1729 0.50 -0.2 1,745,055 - EX28DRAFT_1729 0.50 -0.0 1,745,166 + EX28DRAFT_1729 0.88 +0.2 1,745,166 + EX28DRAFT_1729 0.88 -0.2 1,745,166 + EX28DRAFT_1729 0.88 +0.2 1,745,167 - EX28DRAFT_1729 0.89 -0.5 1,745,197 + -0.5 1,745,198 - -0.3 1,745,198 - -0.3 1,745,274 - -0.0 1,745,330 + +0.3 1,745,408 + EX28DRAFT_1730 0.12 -0.2 1,745,408 + EX28DRAFT_1730 0.12 +0.1 1,745,408 + EX28DRAFT_1730 0.12 -0.0 1,745,408 + EX28DRAFT_1730 0.12 -0.3 1,745,408 + EX28DRAFT_1730 0.12 -0.1 1,745,465 + EX28DRAFT_1730 0.19 -0.1 1,745,466 - EX28DRAFT_1730 0.19 -0.5 1,745,558 - EX28DRAFT_1730 0.29 -0.7 1,745,578 + EX28DRAFT_1730 0.32 -0.2 1,745,607 + EX28DRAFT_1730 0.35 -0.9
Or see this region's nucleotide sequence