Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1693 and EX28DRAFT_1694 are separated by 88 nucleotides EX28DRAFT_1694 and EX28DRAFT_1695 are separated by 85 nucleotides EX28DRAFT_1695 and EX28DRAFT_1696 overlap by 4 nucleotides
EX28DRAFT_1693: EX28DRAFT_1693 - formate dehydrogenase, alpha subunit, archaeal-type, at 1,704,159 to 1,706,309
_1693
EX28DRAFT_1694: EX28DRAFT_1694 - hypothetical protein, at 1,706,398 to 1,706,592
_1694
EX28DRAFT_1695: EX28DRAFT_1695 - uncharacterized domain 1, at 1,706,678 to 1,707,088
_1695
EX28DRAFT_1696: EX28DRAFT_1696 - FAD/FMN-containing dehydrogenases, at 1,707,085 to 1,710,141
_1696
Position (kb)
1706
1707 Strain fitness (log2 ratio)
-2
-1
0
1 at 1705.457 kb on + strand, within EX28DRAFT_1693 at 1705.529 kb on + strand, within EX28DRAFT_1693 at 1705.530 kb on - strand, within EX28DRAFT_1693 at 1705.647 kb on + strand, within EX28DRAFT_1693 at 1705.648 kb on - strand, within EX28DRAFT_1693 at 1705.656 kb on - strand, within EX28DRAFT_1693 at 1705.656 kb on - strand, within EX28DRAFT_1693 at 1705.714 kb on - strand, within EX28DRAFT_1693 at 1705.918 kb on - strand, within EX28DRAFT_1693 at 1706.094 kb on - strand, within EX28DRAFT_1693 at 1706.112 kb on + strand at 1706.112 kb on + strand at 1706.112 kb on + strand at 1706.112 kb on + strand at 1706.113 kb on - strand at 1706.113 kb on - strand at 1706.113 kb on - strand at 1706.113 kb on - strand at 1706.113 kb on - strand at 1706.114 kb on + strand at 1706.115 kb on - strand at 1706.115 kb on - strand at 1706.121 kb on + strand at 1706.122 kb on - strand at 1706.122 kb on - strand at 1706.395 kb on + strand at 1706.514 kb on - strand, within EX28DRAFT_1694 at 1706.548 kb on + strand, within EX28DRAFT_1694 at 1706.549 kb on - strand, within EX28DRAFT_1694 at 1706.625 kb on + strand at 1706.626 kb on - strand at 1706.628 kb on - strand at 1706.628 kb on - strand at 1706.742 kb on - strand, within EX28DRAFT_1695 at 1706.742 kb on - strand, within EX28DRAFT_1695 at 1706.742 kb on - strand, within EX28DRAFT_1695 at 1706.742 kb on - strand, within EX28DRAFT_1695 at 1706.742 kb on - strand, within EX28DRAFT_1695 at 1706.742 kb on - strand, within EX28DRAFT_1695 at 1707.032 kb on - strand, within EX28DRAFT_1695 at 1707.091 kb on + strand at 1707.092 kb on - strand at 1707.092 kb on - strand at 1707.092 kb on - strand at 1707.094 kb on + strand at 1707.095 kb on - strand at 1707.139 kb on + strand at 1707.140 kb on - strand at 1707.230 kb on + strand at 1707.230 kb on + strand at 1707.231 kb on - strand at 1707.231 kb on - strand at 1707.401 kb on + strand, within EX28DRAFT_1696 at 1707.515 kb on + strand, within EX28DRAFT_1696 at 1707.516 kb on - strand, within EX28DRAFT_1696
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,705,457 + EX28DRAFT_1693 0.60 +0.8 1,705,529 + EX28DRAFT_1693 0.64 -0.1 1,705,530 - EX28DRAFT_1693 0.64 +0.1 1,705,647 + EX28DRAFT_1693 0.69 +0.3 1,705,648 - EX28DRAFT_1693 0.69 +0.1 1,705,656 - EX28DRAFT_1693 0.70 +0.1 1,705,656 - EX28DRAFT_1693 0.70 +0.6 1,705,714 - EX28DRAFT_1693 0.72 +0.1 1,705,918 - EX28DRAFT_1693 0.82 -0.3 1,706,094 - EX28DRAFT_1693 0.90 -2.3 1,706,112 + -0.4 1,706,112 + -0.8 1,706,112 + -0.9 1,706,112 + -1.3 1,706,113 - -0.2 1,706,113 - +0.2 1,706,113 - -0.2 1,706,113 - -0.5 1,706,113 - +0.3 1,706,114 + -0.1 1,706,115 - -0.1 1,706,115 - -0.5 1,706,121 + -1.3 1,706,122 - -0.1 1,706,122 - -0.5 1,706,395 + -0.2 1,706,514 - EX28DRAFT_1694 0.59 +0.7 1,706,548 + EX28DRAFT_1694 0.77 +0.8 1,706,549 - EX28DRAFT_1694 0.77 -0.0 1,706,625 + +1.2 1,706,626 - +0.4 1,706,628 - -0.4 1,706,628 - -0.9 1,706,742 - EX28DRAFT_1695 0.16 -1.1 1,706,742 - EX28DRAFT_1695 0.16 +0.7 1,706,742 - EX28DRAFT_1695 0.16 -1.1 1,706,742 - EX28DRAFT_1695 0.16 -0.2 1,706,742 - EX28DRAFT_1695 0.16 +0.4 1,706,742 - EX28DRAFT_1695 0.16 -0.4 1,707,032 - EX28DRAFT_1695 0.86 +0.2 1,707,091 + -0.5 1,707,092 - -0.1 1,707,092 - -0.1 1,707,092 - -0.5 1,707,094 + -0.4 1,707,095 - -0.6 1,707,139 + -0.6 1,707,140 - +0.2 1,707,230 + -0.1 1,707,230 + +0.2 1,707,231 - +0.2 1,707,231 - -0.0 1,707,401 + EX28DRAFT_1696 0.10 -0.7 1,707,515 + EX28DRAFT_1696 0.14 +0.4 1,707,516 - EX28DRAFT_1696 0.14 -0.0
Or see this region's nucleotide sequence