Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_1626

Experiment: MS_media with arsenate 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_1625 and EX28DRAFT_1626 are separated by 0 nucleotidesEX28DRAFT_1626 and EX28DRAFT_1627 are separated by 10 nucleotidesEX28DRAFT_1627 and EX28DRAFT_1628 are separated by 2 nucleotides EX28DRAFT_1625: EX28DRAFT_1625 - electron transport complex, RnfABCDGE type, C subunit, at 1,641,909 to 1,644,044 _1625 EX28DRAFT_1626: EX28DRAFT_1626 - electron transport complex, RnfABCDGE type, D subunit, at 1,644,045 to 1,645,097 _1626 EX28DRAFT_1627: EX28DRAFT_1627 - electron transport complex, RnfABCDGE type, G subunit, at 1,645,108 to 1,645,728 _1627 EX28DRAFT_1628: EX28DRAFT_1628 - electron transport complex, RnfABCDGE type, E subunit, at 1,645,731 to 1,646,417 _1628 Position (kb) 1644 1645 1646Strain fitness (log2 ratio) -2 -1 0 1 2at 1643.238 kb on + strand, within EX28DRAFT_1625at 1643.239 kb on - strand, within EX28DRAFT_1625at 1643.239 kb on - strand, within EX28DRAFT_1625at 1643.842 kb on + strandat 1644.042 kb on + strandat 1644.042 kb on + strandat 1644.042 kb on + strandat 1644.104 kb on + strandat 1644.104 kb on + strandat 1644.105 kb on - strandat 1644.887 kb on - strand, within EX28DRAFT_1626at 1644.887 kb on - strand, within EX28DRAFT_1626at 1645.063 kb on - strandat 1645.112 kb on + strandat 1645.752 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM
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1,643,238 + EX28DRAFT_1625 0.62 +0.7
1,643,239 - EX28DRAFT_1625 0.62 +1.9
1,643,239 - EX28DRAFT_1625 0.62 +0.2
1,643,842 + -0.1
1,644,042 + -1.3
1,644,042 + -0.8
1,644,042 + -1.0
1,644,104 + -0.6
1,644,104 + -0.3
1,644,105 - -1.2
1,644,887 - EX28DRAFT_1626 0.80 -0.8
1,644,887 - EX28DRAFT_1626 0.80 -1.9
1,645,063 - -0.9
1,645,112 + +0.2
1,645,752 - -0.7

Or see this region's nucleotide sequence