Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1625 and EX28DRAFT_1626 are separated by 0 nucleotides EX28DRAFT_1626 and EX28DRAFT_1627 are separated by 10 nucleotides EX28DRAFT_1627 and EX28DRAFT_1628 are separated by 2 nucleotides
EX28DRAFT_1625: EX28DRAFT_1625 - electron transport complex, RnfABCDGE type, C subunit, at 1,641,909 to 1,644,044
_1625
EX28DRAFT_1626: EX28DRAFT_1626 - electron transport complex, RnfABCDGE type, D subunit, at 1,644,045 to 1,645,097
_1626
EX28DRAFT_1627: EX28DRAFT_1627 - electron transport complex, RnfABCDGE type, G subunit, at 1,645,108 to 1,645,728
_1627
EX28DRAFT_1628: EX28DRAFT_1628 - electron transport complex, RnfABCDGE type, E subunit, at 1,645,731 to 1,646,417
_1628
Position (kb)
1644
1645
1646 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1643.238 kb on + strand, within EX28DRAFT_1625 at 1643.239 kb on - strand, within EX28DRAFT_1625 at 1643.239 kb on - strand, within EX28DRAFT_1625 at 1643.842 kb on + strand at 1644.042 kb on + strand at 1644.042 kb on + strand at 1644.042 kb on + strand at 1644.104 kb on + strand at 1644.104 kb on + strand at 1644.105 kb on - strand at 1644.887 kb on - strand, within EX28DRAFT_1626 at 1644.887 kb on - strand, within EX28DRAFT_1626 at 1645.063 kb on - strand at 1645.112 kb on + strand at 1645.752 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,643,238 + EX28DRAFT_1625 0.62 +0.7 1,643,239 - EX28DRAFT_1625 0.62 +1.9 1,643,239 - EX28DRAFT_1625 0.62 +0.2 1,643,842 + -0.1 1,644,042 + -1.3 1,644,042 + -0.8 1,644,042 + -1.0 1,644,104 + -0.6 1,644,104 + -0.3 1,644,105 - -1.2 1,644,887 - EX28DRAFT_1626 0.80 -0.8 1,644,887 - EX28DRAFT_1626 0.80 -1.9 1,645,063 - -0.9 1,645,112 + +0.2 1,645,752 - -0.7
Or see this region's nucleotide sequence