Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1306 and EX28DRAFT_1307 are separated by 271 nucleotides EX28DRAFT_1307 and EX28DRAFT_1308 overlap by 4 nucleotides EX28DRAFT_1308 and EX28DRAFT_1309 overlap by 4 nucleotides EX28DRAFT_1309 and EX28DRAFT_1310 are separated by 1 nucleotides
EX28DRAFT_1306: EX28DRAFT_1306 - hypothetical protein, at 1,312,844 to 1,313,353
_1306
EX28DRAFT_1307: EX28DRAFT_1307 - hypothetical protein, at 1,313,625 to 1,313,978
_1307
EX28DRAFT_1308: EX28DRAFT_1308 - hypothetical protein, at 1,313,975 to 1,314,172
_1308
EX28DRAFT_1309: EX28DRAFT_1309 - hypothetical protein, at 1,314,169 to 1,314,744
_1309
EX28DRAFT_1310: EX28DRAFT_1310 - phage replication protein P, at 1,314,746 to 1,315,435
_1310
Position (kb)
1313
1314
1315 Strain fitness (log2 ratio)
-2
-1
0
1 at 1313.089 kb on - strand, within EX28DRAFT_1306 at 1313.345 kb on - strand at 1313.410 kb on - strand at 1313.410 kb on - strand at 1313.437 kb on - strand at 1313.437 kb on - strand at 1313.470 kb on - strand at 1313.470 kb on - strand at 1313.492 kb on - strand at 1313.626 kb on + strand at 1313.627 kb on - strand at 1313.845 kb on - strand, within EX28DRAFT_1307 at 1313.883 kb on + strand, within EX28DRAFT_1307 at 1313.919 kb on + strand, within EX28DRAFT_1307 at 1313.952 kb on + strand at 1314.012 kb on - strand, within EX28DRAFT_1308 at 1314.113 kb on + strand, within EX28DRAFT_1308 at 1314.179 kb on - strand at 1314.179 kb on - strand at 1314.355 kb on + strand, within EX28DRAFT_1309 at 1314.437 kb on - strand, within EX28DRAFT_1309 at 1314.667 kb on + strand, within EX28DRAFT_1309 at 1314.713 kb on + strand at 1314.713 kb on + strand at 1314.714 kb on - strand at 1314.734 kb on - strand at 1314.932 kb on + strand, within EX28DRAFT_1310 at 1314.978 kb on + strand, within EX28DRAFT_1310 at 1314.979 kb on - strand, within EX28DRAFT_1310
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,313,089 - EX28DRAFT_1306 0.48 +0.3 1,313,345 - -0.5 1,313,410 - +0.1 1,313,410 - -1.3 1,313,437 - +0.2 1,313,437 - -0.0 1,313,470 - -1.1 1,313,470 - -2.2 1,313,492 - +0.1 1,313,626 + +0.5 1,313,627 - +0.4 1,313,845 - EX28DRAFT_1307 0.62 +1.0 1,313,883 + EX28DRAFT_1307 0.73 -0.8 1,313,919 + EX28DRAFT_1307 0.83 -0.4 1,313,952 + -0.3 1,314,012 - EX28DRAFT_1308 0.19 -1.7 1,314,113 + EX28DRAFT_1308 0.70 -0.2 1,314,179 - -0.3 1,314,179 - -0.4 1,314,355 + EX28DRAFT_1309 0.32 +0.2 1,314,437 - EX28DRAFT_1309 0.47 +0.1 1,314,667 + EX28DRAFT_1309 0.86 +0.5 1,314,713 + +0.5 1,314,713 + +0.4 1,314,714 - +0.1 1,314,734 - +1.2 1,314,932 + EX28DRAFT_1310 0.27 -0.4 1,314,978 + EX28DRAFT_1310 0.34 +1.0 1,314,979 - EX28DRAFT_1310 0.34 -0.1
Or see this region's nucleotide sequence