Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1198 and EX28DRAFT_1199 are separated by 98 nucleotides EX28DRAFT_1199 and EX28DRAFT_1200 overlap by 47 nucleotides EX28DRAFT_1200 and EX28DRAFT_1201 are separated by 84 nucleotides
EX28DRAFT_1198: EX28DRAFT_1198 - NAD-dependent aldehyde dehydrogenases, at 1,218,263 to 1,219,651
_1198
EX28DRAFT_1199: EX28DRAFT_1199 - Transcriptional regulator, at 1,219,750 to 1,220,628
_1199
EX28DRAFT_1200: EX28DRAFT_1200 - Acetyltransferases, at 1,220,582 to 1,221,064
_1200
EX28DRAFT_1201: EX28DRAFT_1201 - phenazine biosynthesis protein PhzF family, at 1,221,149 to 1,221,940
_1201
Position (kb)
1219
1220
1221 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1218.830 kb on - strand, within EX28DRAFT_1198 at 1218.920 kb on - strand, within EX28DRAFT_1198 at 1218.920 kb on - strand, within EX28DRAFT_1198 at 1218.920 kb on - strand, within EX28DRAFT_1198 at 1219.065 kb on - strand, within EX28DRAFT_1198 at 1219.139 kb on - strand, within EX28DRAFT_1198 at 1219.183 kb on - strand, within EX28DRAFT_1198 at 1219.189 kb on + strand, within EX28DRAFT_1198 at 1219.282 kb on - strand, within EX28DRAFT_1198 at 1219.645 kb on - strand at 1219.645 kb on - strand at 1219.757 kb on + strand at 1220.019 kb on - strand, within EX28DRAFT_1199 at 1220.019 kb on - strand, within EX28DRAFT_1199 at 1220.151 kb on - strand, within EX28DRAFT_1199 at 1220.305 kb on + strand, within EX28DRAFT_1199 at 1220.305 kb on + strand, within EX28DRAFT_1199 at 1220.402 kb on - strand, within EX28DRAFT_1199 at 1220.583 kb on + strand at 1220.584 kb on - strand at 1220.830 kb on - strand, within EX28DRAFT_1200 at 1220.830 kb on - strand, within EX28DRAFT_1200 at 1220.830 kb on - strand, within EX28DRAFT_1200 at 1220.979 kb on + strand, within EX28DRAFT_1200 at 1221.052 kb on + strand at 1221.061 kb on - strand at 1221.061 kb on - strand at 1221.085 kb on + strand at 1221.085 kb on + strand at 1221.086 kb on - strand at 1221.087 kb on + strand at 1221.095 kb on + strand at 1221.095 kb on + strand at 1221.095 kb on + strand at 1221.096 kb on - strand at 1221.124 kb on + strand at 1221.125 kb on - strand at 1221.125 kb on - strand at 1221.127 kb on + strand at 1221.127 kb on + strand at 1221.128 kb on - strand at 1221.128 kb on - strand at 1221.128 kb on - strand at 1221.132 kb on + strand at 1221.132 kb on + strand at 1221.132 kb on + strand at 1221.134 kb on + strand at 1221.175 kb on + strand at 1221.177 kb on + strand at 1221.177 kb on + strand at 1221.177 kb on + strand at 1221.177 kb on + strand at 1221.177 kb on + strand at 1221.177 kb on + strand at 1221.177 kb on + strand at 1221.178 kb on - strand at 1221.178 kb on - strand at 1221.178 kb on - strand at 1221.178 kb on - strand at 1221.178 kb on - strand at 1221.384 kb on + strand, within EX28DRAFT_1201 at 1221.492 kb on + strand, within EX28DRAFT_1201 at 1221.492 kb on + strand, within EX28DRAFT_1201 at 1221.492 kb on + strand, within EX28DRAFT_1201 at 1221.493 kb on - strand, within EX28DRAFT_1201
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,218,830 - EX28DRAFT_1198 0.41 +0.1 1,218,920 - EX28DRAFT_1198 0.47 -0.1 1,218,920 - EX28DRAFT_1198 0.47 -0.6 1,218,920 - EX28DRAFT_1198 0.47 +0.7 1,219,065 - EX28DRAFT_1198 0.58 -0.9 1,219,139 - EX28DRAFT_1198 0.63 +1.5 1,219,183 - EX28DRAFT_1198 0.66 +0.1 1,219,189 + EX28DRAFT_1198 0.67 +0.2 1,219,282 - EX28DRAFT_1198 0.73 +0.3 1,219,645 - -1.9 1,219,645 - +0.4 1,219,757 + +0.3 1,220,019 - EX28DRAFT_1199 0.31 +0.4 1,220,019 - EX28DRAFT_1199 0.31 +0.5 1,220,151 - EX28DRAFT_1199 0.46 -0.9 1,220,305 + EX28DRAFT_1199 0.63 +0.6 1,220,305 + EX28DRAFT_1199 0.63 -0.0 1,220,402 - EX28DRAFT_1199 0.74 +0.1 1,220,583 + -0.7 1,220,584 - +0.1 1,220,830 - EX28DRAFT_1200 0.51 +0.1 1,220,830 - EX28DRAFT_1200 0.51 +0.8 1,220,830 - EX28DRAFT_1200 0.51 -0.2 1,220,979 + EX28DRAFT_1200 0.82 +0.4 1,221,052 + +0.2 1,221,061 - +0.1 1,221,061 - +0.5 1,221,085 + +0.8 1,221,085 + +0.8 1,221,086 - -0.7 1,221,087 + -0.4 1,221,095 + +3.1 1,221,095 + -0.4 1,221,095 + +0.5 1,221,096 - -0.1 1,221,124 + -0.5 1,221,125 - -0.5 1,221,125 - -0.4 1,221,127 + +0.2 1,221,127 + +0.3 1,221,128 - +1.2 1,221,128 - -0.1 1,221,128 - -0.2 1,221,132 + +0.7 1,221,132 + -0.3 1,221,132 + +0.4 1,221,134 + +0.6 1,221,175 + -0.1 1,221,177 + +0.4 1,221,177 + +1.9 1,221,177 + +0.4 1,221,177 + +0.4 1,221,177 + -0.8 1,221,177 + +0.5 1,221,177 + +0.0 1,221,178 - -0.5 1,221,178 - -0.3 1,221,178 - -0.0 1,221,178 - -1.4 1,221,178 - -3.2 1,221,384 + EX28DRAFT_1201 0.30 -0.0 1,221,492 + EX28DRAFT_1201 0.43 -0.9 1,221,492 + EX28DRAFT_1201 0.43 -0.3 1,221,492 + EX28DRAFT_1201 0.43 -0.6 1,221,493 - EX28DRAFT_1201 0.43 +0.6
Or see this region's nucleotide sequence