Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1121 and EX28DRAFT_1122 are separated by 173 nucleotides EX28DRAFT_1122 and EX28DRAFT_1123 are separated by 66 nucleotides
EX28DRAFT_1121: EX28DRAFT_1121 - Sugar kinases, ribokinase family, at 1,134,512 to 1,135,402
_1121
EX28DRAFT_1122: EX28DRAFT_1122 - Maltoporin (phage lambda and maltose receptor), at 1,135,576 to 1,137,093
_1122
EX28DRAFT_1123: EX28DRAFT_1123 - PTS system, sucrose-specific IIBC component, at 1,137,160 to 1,138,530
_1123
Position (kb)
1135
1136
1137
1138 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 1134.727 kb on + strand, within EX28DRAFT_1121 at 1134.727 kb on + strand, within EX28DRAFT_1121 at 1134.806 kb on - strand, within EX28DRAFT_1121 at 1135.401 kb on - strand at 1135.511 kb on - strand at 1135.561 kb on + strand at 1135.627 kb on - strand at 1136.084 kb on - strand, within EX28DRAFT_1122 at 1136.084 kb on - strand, within EX28DRAFT_1122 at 1136.374 kb on + strand, within EX28DRAFT_1122 at 1136.374 kb on + strand, within EX28DRAFT_1122 at 1136.375 kb on - strand, within EX28DRAFT_1122 at 1136.375 kb on - strand, within EX28DRAFT_1122 at 1136.377 kb on - strand, within EX28DRAFT_1122 at 1136.539 kb on + strand, within EX28DRAFT_1122 at 1136.540 kb on - strand, within EX28DRAFT_1122 at 1136.728 kb on - strand, within EX28DRAFT_1122 at 1136.737 kb on + strand, within EX28DRAFT_1122 at 1136.738 kb on - strand, within EX28DRAFT_1122 at 1136.738 kb on - strand, within EX28DRAFT_1122 at 1136.756 kb on - strand, within EX28DRAFT_1122 at 1136.756 kb on - strand, within EX28DRAFT_1122 at 1136.831 kb on - strand, within EX28DRAFT_1122 at 1136.837 kb on - strand, within EX28DRAFT_1122 at 1136.837 kb on - strand, within EX28DRAFT_1122 at 1136.837 kb on - strand, within EX28DRAFT_1122 at 1136.837 kb on - strand, within EX28DRAFT_1122 at 1137.135 kb on - strand at 1137.135 kb on - strand at 1137.154 kb on + strand at 1137.155 kb on + strand at 1137.155 kb on + strand at 1137.155 kb on + strand at 1137.156 kb on - strand at 1137.156 kb on - strand at 1137.159 kb on + strand at 1137.160 kb on - strand at 1137.379 kb on + strand, within EX28DRAFT_1123 at 1137.566 kb on - strand, within EX28DRAFT_1123 at 1137.595 kb on + strand, within EX28DRAFT_1123 at 1137.595 kb on + strand, within EX28DRAFT_1123 at 1137.596 kb on - strand, within EX28DRAFT_1123 at 1137.688 kb on + strand, within EX28DRAFT_1123 at 1137.893 kb on + strand, within EX28DRAFT_1123 at 1137.894 kb on - strand, within EX28DRAFT_1123 at 1137.928 kb on - strand, within EX28DRAFT_1123 at 1137.928 kb on - strand, within EX28DRAFT_1123 at 1138.006 kb on - strand, within EX28DRAFT_1123
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,134,727 + EX28DRAFT_1121 0.24 +0.3 1,134,727 + EX28DRAFT_1121 0.24 +0.4 1,134,806 - EX28DRAFT_1121 0.33 -2.1 1,135,401 - +1.3 1,135,511 - -1.5 1,135,561 + -1.7 1,135,627 - +0.3 1,136,084 - EX28DRAFT_1122 0.33 -4.8 1,136,084 - EX28DRAFT_1122 0.33 -2.3 1,136,374 + EX28DRAFT_1122 0.53 -3.6 1,136,374 + EX28DRAFT_1122 0.53 -2.5 1,136,375 - EX28DRAFT_1122 0.53 -3.4 1,136,375 - EX28DRAFT_1122 0.53 -3.5 1,136,377 - EX28DRAFT_1122 0.53 -4.2 1,136,539 + EX28DRAFT_1122 0.63 -1.1 1,136,540 - EX28DRAFT_1122 0.64 -4.9 1,136,728 - EX28DRAFT_1122 0.76 -1.5 1,136,737 + EX28DRAFT_1122 0.76 -1.2 1,136,738 - EX28DRAFT_1122 0.77 -3.4 1,136,738 - EX28DRAFT_1122 0.77 -5.8 1,136,756 - EX28DRAFT_1122 0.78 -2.6 1,136,756 - EX28DRAFT_1122 0.78 -3.5 1,136,831 - EX28DRAFT_1122 0.83 -4.2 1,136,837 - EX28DRAFT_1122 0.83 -2.6 1,136,837 - EX28DRAFT_1122 0.83 -4.7 1,136,837 - EX28DRAFT_1122 0.83 -5.3 1,136,837 - EX28DRAFT_1122 0.83 -4.4 1,137,135 - -4.2 1,137,135 - -4.5 1,137,154 + -2.5 1,137,155 + -2.3 1,137,155 + -4.2 1,137,155 + -2.7 1,137,156 - -4.1 1,137,156 - -3.9 1,137,159 + -2.9 1,137,160 - -3.2 1,137,379 + EX28DRAFT_1123 0.16 -5.3 1,137,566 - EX28DRAFT_1123 0.30 -4.3 1,137,595 + EX28DRAFT_1123 0.32 -2.6 1,137,595 + EX28DRAFT_1123 0.32 -2.8 1,137,596 - EX28DRAFT_1123 0.32 -3.1 1,137,688 + EX28DRAFT_1123 0.39 -3.7 1,137,893 + EX28DRAFT_1123 0.53 -1.6 1,137,894 - EX28DRAFT_1123 0.54 -4.7 1,137,928 - EX28DRAFT_1123 0.56 +0.1 1,137,928 - EX28DRAFT_1123 0.56 -4.9 1,138,006 - EX28DRAFT_1123 0.62 -4.0
Or see this region's nucleotide sequence