Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0934 and EX28DRAFT_0935 are separated by 3 nucleotides EX28DRAFT_0935 and EX28DRAFT_0936 overlap by 1 nucleotides
EX28DRAFT_0934: EX28DRAFT_0934 - indole-3-glycerol phosphate synthase (EC 4.1.1.48), at 932,695 to 934,053
_0934
EX28DRAFT_0935: EX28DRAFT_0935 - glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase, at 934,057 to 935,652
_0935
EX28DRAFT_0936: EX28DRAFT_0936 - anthranilate synthase, component I (EC 4.1.3.27), at 935,652 to 937,214
_0936
Position (kb) 934
935
936 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 933.108 kb on + strand, within EX28DRAFT_0934 at 933.108 kb on + strand, within EX28DRAFT_0934 at 933.108 kb on + strand, within EX28DRAFT_0934 at 933.134 kb on + strand, within EX28DRAFT_0934 at 933.134 kb on + strand, within EX28DRAFT_0934 at 933.134 kb on + strand, within EX28DRAFT_0934 at 933.135 kb on - strand, within EX28DRAFT_0934 at 933.135 kb on - strand, within EX28DRAFT_0934 at 933.163 kb on - strand, within EX28DRAFT_0934 at 933.163 kb on - strand, within EX28DRAFT_0934 at 933.377 kb on - strand, within EX28DRAFT_0934 at 933.377 kb on - strand, within EX28DRAFT_0934 at 933.669 kb on - strand, within EX28DRAFT_0934 at 933.669 kb on - strand, within EX28DRAFT_0934 at 933.702 kb on + strand, within EX28DRAFT_0934 at 933.706 kb on - strand, within EX28DRAFT_0934 at 933.824 kb on + strand, within EX28DRAFT_0934 at 933.935 kb on + strand at 934.111 kb on + strand at 934.112 kb on - strand at 934.112 kb on - strand at 934.112 kb on - strand at 934.228 kb on + strand, within EX28DRAFT_0935 at 934.290 kb on - strand, within EX28DRAFT_0935 at 934.290 kb on - strand, within EX28DRAFT_0935 at 934.326 kb on - strand, within EX28DRAFT_0935 at 934.326 kb on - strand, within EX28DRAFT_0935 at 934.596 kb on - strand, within EX28DRAFT_0935 at 934.662 kb on + strand, within EX28DRAFT_0935 at 934.674 kb on + strand, within EX28DRAFT_0935 at 934.789 kb on - strand, within EX28DRAFT_0935 at 934.801 kb on - strand, within EX28DRAFT_0935 at 934.828 kb on - strand, within EX28DRAFT_0935 at 935.235 kb on + strand, within EX28DRAFT_0935 at 935.373 kb on - strand, within EX28DRAFT_0935 at 935.565 kb on + strand at 935.565 kb on + strand at 935.609 kb on + strand at 935.610 kb on - strand at 935.626 kb on - strand at 935.681 kb on + strand at 936.038 kb on - strand, within EX28DRAFT_0936 at 936.340 kb on + strand, within EX28DRAFT_0936 at 936.341 kb on - strand, within EX28DRAFT_0936 at 936.374 kb on - strand, within EX28DRAFT_0936
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 933,108 + EX28DRAFT_0934 0.30 -2.1 933,108 + EX28DRAFT_0934 0.30 -2.9 933,108 + EX28DRAFT_0934 0.30 -1.9 933,134 + EX28DRAFT_0934 0.32 -2.2 933,134 + EX28DRAFT_0934 0.32 -0.2 933,134 + EX28DRAFT_0934 0.32 -3.3 933,135 - EX28DRAFT_0934 0.32 -5.5 933,135 - EX28DRAFT_0934 0.32 +0.1 933,163 - EX28DRAFT_0934 0.34 -2.3 933,163 - EX28DRAFT_0934 0.34 -4.2 933,377 - EX28DRAFT_0934 0.50 -2.6 933,377 - EX28DRAFT_0934 0.50 -1.8 933,669 - EX28DRAFT_0934 0.72 -2.8 933,669 - EX28DRAFT_0934 0.72 -3.5 933,702 + EX28DRAFT_0934 0.74 -0.2 933,706 - EX28DRAFT_0934 0.74 -3.2 933,824 + EX28DRAFT_0934 0.83 +0.8 933,935 + -1.3 934,111 + -1.2 934,112 - -3.3 934,112 - -1.4 934,112 - -3.4 934,228 + EX28DRAFT_0935 0.11 -3.7 934,290 - EX28DRAFT_0935 0.15 -2.4 934,290 - EX28DRAFT_0935 0.15 -2.6 934,326 - EX28DRAFT_0935 0.17 -2.2 934,326 - EX28DRAFT_0935 0.17 -1.3 934,596 - EX28DRAFT_0935 0.34 -3.3 934,662 + EX28DRAFT_0935 0.38 -2.9 934,674 + EX28DRAFT_0935 0.39 +0.1 934,789 - EX28DRAFT_0935 0.46 -1.2 934,801 - EX28DRAFT_0935 0.47 -0.3 934,828 - EX28DRAFT_0935 0.48 -2.5 935,235 + EX28DRAFT_0935 0.74 -3.9 935,373 - EX28DRAFT_0935 0.82 -2.5 935,565 + -1.7 935,565 + -3.3 935,609 + -4.7 935,610 - -3.8 935,626 - -3.9 935,681 + -3.7 936,038 - EX28DRAFT_0936 0.25 -3.7 936,340 + EX28DRAFT_0936 0.44 -3.2 936,341 - EX28DRAFT_0936 0.44 -1.5 936,374 - EX28DRAFT_0936 0.46 -4.9
Or see this region's nucleotide sequence