Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0857

Experiment: MS_media with arsenate 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_0856 and EX28DRAFT_0857 are separated by 652 nucleotidesEX28DRAFT_0857 and EX28DRAFT_0858 are separated by 157 nucleotides EX28DRAFT_0856: EX28DRAFT_0856 - Transcriptional regulators, at 868,464 to 868,907 _0856 EX28DRAFT_0857: EX28DRAFT_0857 - tRNA, at 869,560 to 869,641 _0857 EX28DRAFT_0858: EX28DRAFT_0858 - formyltetrahydrofolate deformylase, at 869,799 to 870,641 _0858 Position (kb) 869 870Strain fitness (log2 ratio) -1 0 1at 868.658 kb on + strand, within EX28DRAFT_0856at 868.707 kb on - strand, within EX28DRAFT_0856at 868.719 kb on + strand, within EX28DRAFT_0856at 868.719 kb on + strand, within EX28DRAFT_0856at 868.744 kb on + strand, within EX28DRAFT_0856at 868.744 kb on + strand, within EX28DRAFT_0856at 868.856 kb on + strand, within EX28DRAFT_0856at 869.606 kb on - strand, within EX28DRAFT_0857at 869.715 kb on - strandat 869.801 kb on - strandat 869.920 kb on + strand, within EX28DRAFT_0858at 869.920 kb on + strand, within EX28DRAFT_0858at 869.921 kb on - strand, within EX28DRAFT_0858at 869.921 kb on - strand, within EX28DRAFT_0858at 869.986 kb on + strand, within EX28DRAFT_0858at 870.092 kb on + strand, within EX28DRAFT_0858at 870.154 kb on + strand, within EX28DRAFT_0858at 870.154 kb on + strand, within EX28DRAFT_0858at 870.154 kb on + strand, within EX28DRAFT_0858at 870.155 kb on - strand, within EX28DRAFT_0858at 870.623 kb on + strandat 870.630 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM
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868,658 + EX28DRAFT_0856 0.44 +0.4
868,707 - EX28DRAFT_0856 0.55 -0.2
868,719 + EX28DRAFT_0856 0.57 -0.0
868,719 + EX28DRAFT_0856 0.57 -0.7
868,744 + EX28DRAFT_0856 0.63 +0.3
868,744 + EX28DRAFT_0856 0.63 -1.3
868,856 + EX28DRAFT_0856 0.88 +0.3
869,606 - EX28DRAFT_0857 0.56 -1.0
869,715 - -0.3
869,801 - -0.7
869,920 + EX28DRAFT_0858 0.14 +0.2
869,920 + EX28DRAFT_0858 0.14 -0.0
869,921 - EX28DRAFT_0858 0.14 -0.1
869,921 - EX28DRAFT_0858 0.14 +0.0
869,986 + EX28DRAFT_0858 0.22 -0.6
870,092 + EX28DRAFT_0858 0.35 -0.2
870,154 + EX28DRAFT_0858 0.42 -0.4
870,154 + EX28DRAFT_0858 0.42 +0.5
870,154 + EX28DRAFT_0858 0.42 -0.4
870,155 - EX28DRAFT_0858 0.42 -0.2
870,623 + -0.1
870,630 + -0.1

Or see this region's nucleotide sequence