Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0776 and EX28DRAFT_0777 are separated by 48 nucleotides EX28DRAFT_0777 and EX28DRAFT_0778 are separated by 0 nucleotides EX28DRAFT_0778 and EX28DRAFT_0779 overlap by 1 nucleotides EX28DRAFT_0779 and EX28DRAFT_0780 are separated by 281 nucleotides
EX28DRAFT_0776: EX28DRAFT_0776 - Arabinose efflux permease, at 774,898 to 776,085
_0776
EX28DRAFT_0777: EX28DRAFT_0777 - type VI secretion system effector, Hcp1 family, at 776,134 to 776,613
_0777
EX28DRAFT_0778: EX28DRAFT_0778 - hypothetical protein, at 776,614 to 776,835
_0778
EX28DRAFT_0779: EX28DRAFT_0779 - hypothetical protein, at 776,835 to 777,539
_0779
EX28DRAFT_0780: EX28DRAFT_0780 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 777,821 to 778,831
_0780
Position (kb) 776
777 Strain fitness (log2 ratio) -2
-1
0
1 at 776.116 kb on + strand at 776.116 kb on + strand at 776.264 kb on - strand, within EX28DRAFT_0777 at 776.596 kb on - strand at 776.616 kb on - strand at 776.662 kb on + strand, within EX28DRAFT_0778 at 776.850 kb on - strand at 776.890 kb on - strand at 776.894 kb on + strand at 776.936 kb on - strand, within EX28DRAFT_0779 at 777.055 kb on - strand, within EX28DRAFT_0779 at 777.133 kb on + strand, within EX28DRAFT_0779 at 777.184 kb on + strand, within EX28DRAFT_0779 at 777.205 kb on - strand, within EX28DRAFT_0779 at 777.303 kb on - strand, within EX28DRAFT_0779 at 777.753 kb on + strand at 777.772 kb on - strand at 777.822 kb on + strand at 777.823 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 776,116 + -1.1 776,116 + +0.8 776,264 - EX28DRAFT_0777 0.27 -0.6 776,596 - +0.5 776,616 - -0.0 776,662 + EX28DRAFT_0778 0.22 -1.0 776,850 - -0.8 776,890 - +0.6 776,894 + +0.4 776,936 - EX28DRAFT_0779 0.14 -0.2 777,055 - EX28DRAFT_0779 0.31 -2.2 777,133 + EX28DRAFT_0779 0.42 -0.0 777,184 + EX28DRAFT_0779 0.50 +0.6 777,205 - EX28DRAFT_0779 0.52 +0.6 777,303 - EX28DRAFT_0779 0.66 -0.9 777,753 + -0.0 777,772 - -0.2 777,822 + -0.6 777,823 - +0.4
Or see this region's nucleotide sequence