Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0702 and EX28DRAFT_0703 are separated by 140 nucleotides EX28DRAFT_0703 and EX28DRAFT_0704 are separated by 356 nucleotides
EX28DRAFT_0702: EX28DRAFT_0702 - pyruvate kinase, at 699,089 to 700,531
_0702
EX28DRAFT_0703: EX28DRAFT_0703 - transcriptional regulator, RpiR family, at 700,672 to 701,541
_0703
EX28DRAFT_0704: EX28DRAFT_0704 - glucose-6-phosphate 1-dehydrogenase, at 701,898 to 703,373
_0704
Position (kb) 700
701
702 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 699.916 kb on - strand, within EX28DRAFT_0702 at 699.916 kb on - strand, within EX28DRAFT_0702 at 699.957 kb on + strand, within EX28DRAFT_0702 at 700.054 kb on + strand, within EX28DRAFT_0702 at 700.190 kb on - strand, within EX28DRAFT_0702 at 700.190 kb on - strand, within EX28DRAFT_0702 at 700.190 kb on - strand, within EX28DRAFT_0702 at 700.191 kb on + strand, within EX28DRAFT_0702 at 700.386 kb on - strand, within EX28DRAFT_0702 at 700.423 kb on + strand at 700.423 kb on + strand at 700.533 kb on + strand at 700.533 kb on + strand at 700.534 kb on - strand at 700.534 kb on - strand at 700.534 kb on - strand at 700.534 kb on - strand at 700.534 kb on - strand at 700.534 kb on - strand at 700.537 kb on - strand at 700.635 kb on - strand at 700.642 kb on - strand at 700.642 kb on - strand at 700.652 kb on + strand at 700.653 kb on - strand at 700.653 kb on - strand at 700.671 kb on - strand at 700.691 kb on - strand at 700.691 kb on - strand at 700.691 kb on - strand at 700.691 kb on - strand at 700.774 kb on + strand, within EX28DRAFT_0703 at 700.775 kb on - strand, within EX28DRAFT_0703 at 700.840 kb on - strand, within EX28DRAFT_0703 at 700.842 kb on - strand, within EX28DRAFT_0703 at 700.842 kb on - strand, within EX28DRAFT_0703 at 700.842 kb on - strand, within EX28DRAFT_0703 at 700.906 kb on - strand, within EX28DRAFT_0703 at 700.966 kb on + strand, within EX28DRAFT_0703 at 700.966 kb on + strand, within EX28DRAFT_0703 at 700.967 kb on - strand, within EX28DRAFT_0703 at 701.009 kb on - strand, within EX28DRAFT_0703 at 701.032 kb on - strand, within EX28DRAFT_0703 at 701.066 kb on + strand, within EX28DRAFT_0703 at 701.170 kb on + strand, within EX28DRAFT_0703 at 701.170 kb on + strand, within EX28DRAFT_0703 at 701.262 kb on - strand, within EX28DRAFT_0703 at 701.262 kb on - strand, within EX28DRAFT_0703 at 701.262 kb on - strand, within EX28DRAFT_0703 at 701.262 kb on - strand, within EX28DRAFT_0703 at 701.292 kb on + strand, within EX28DRAFT_0703 at 701.298 kb on + strand, within EX28DRAFT_0703 at 701.303 kb on + strand, within EX28DRAFT_0703 at 701.303 kb on + strand, within EX28DRAFT_0703 at 701.303 kb on + strand, within EX28DRAFT_0703 at 701.544 kb on + strand at 701.652 kb on - strand at 701.748 kb on + strand at 701.748 kb on + strand at 701.748 kb on + strand at 701.748 kb on + strand at 701.748 kb on + strand at 701.749 kb on - strand at 701.749 kb on - strand at 701.749 kb on - strand at 701.856 kb on + strand at 701.869 kb on + strand at 702.071 kb on + strand, within EX28DRAFT_0704
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 699,916 - EX28DRAFT_0702 0.57 -0.7 699,916 - EX28DRAFT_0702 0.57 +0.5 699,957 + EX28DRAFT_0702 0.60 +0.2 700,054 + EX28DRAFT_0702 0.67 -0.3 700,190 - EX28DRAFT_0702 0.76 +1.3 700,190 - EX28DRAFT_0702 0.76 -0.2 700,190 - EX28DRAFT_0702 0.76 -0.4 700,191 + EX28DRAFT_0702 0.76 +0.4 700,386 - EX28DRAFT_0702 0.90 +1.6 700,423 + +0.3 700,423 + +0.8 700,533 + -0.1 700,533 + +0.1 700,534 - -0.0 700,534 - +1.3 700,534 - +0.5 700,534 - +0.7 700,534 - -0.1 700,534 - +1.1 700,537 - +0.5 700,635 - +0.1 700,642 - +0.4 700,642 - -0.4 700,652 + +0.1 700,653 - +0.2 700,653 - -0.4 700,671 - +0.2 700,691 - -1.1 700,691 - -0.5 700,691 - +0.0 700,691 - +0.0 700,774 + EX28DRAFT_0703 0.12 +0.4 700,775 - EX28DRAFT_0703 0.12 -1.2 700,840 - EX28DRAFT_0703 0.19 -1.3 700,842 - EX28DRAFT_0703 0.20 -0.5 700,842 - EX28DRAFT_0703 0.20 -1.6 700,842 - EX28DRAFT_0703 0.20 -0.9 700,906 - EX28DRAFT_0703 0.27 -0.8 700,966 + EX28DRAFT_0703 0.34 +0.2 700,966 + EX28DRAFT_0703 0.34 -0.3 700,967 - EX28DRAFT_0703 0.34 -1.0 701,009 - EX28DRAFT_0703 0.39 +0.7 701,032 - EX28DRAFT_0703 0.41 -0.1 701,066 + EX28DRAFT_0703 0.45 -0.1 701,170 + EX28DRAFT_0703 0.57 +0.1 701,170 + EX28DRAFT_0703 0.57 +0.4 701,262 - EX28DRAFT_0703 0.68 -0.5 701,262 - EX28DRAFT_0703 0.68 -0.5 701,262 - EX28DRAFT_0703 0.68 -0.4 701,262 - EX28DRAFT_0703 0.68 -0.8 701,292 + EX28DRAFT_0703 0.71 +0.2 701,298 + EX28DRAFT_0703 0.72 +1.1 701,303 + EX28DRAFT_0703 0.73 +0.2 701,303 + EX28DRAFT_0703 0.73 -0.8 701,303 + EX28DRAFT_0703 0.73 +1.7 701,544 + +0.2 701,652 - -0.2 701,748 + -0.1 701,748 + +0.0 701,748 + +0.8 701,748 + -0.7 701,748 + +0.9 701,749 - -0.8 701,749 - +0.8 701,749 - +0.4 701,856 + -0.1 701,869 + +0.3 702,071 + EX28DRAFT_0704 0.12 -2.9
Or see this region's nucleotide sequence