Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0572 and EX28DRAFT_0573 are separated by 26 nucleotides EX28DRAFT_0573 and EX28DRAFT_0574 overlap by 4 nucleotides
EX28DRAFT_0572: EX28DRAFT_0572 - TonB-dependent siderophore receptor, at 567,678 to 569,867
_0572
EX28DRAFT_0573: EX28DRAFT_0573 - Lysine/ornithine N-monooxygenase, at 569,894 to 571,219
_0573
EX28DRAFT_0574: EX28DRAFT_0574 - Siderophore synthetase component, at 571,216 to 572,958
_0574
Position (kb) 569
570
571
572 Strain fitness (log2 ratio) -1
0
1 at 568.906 kb on + strand, within EX28DRAFT_0572 at 568.907 kb on - strand, within EX28DRAFT_0572 at 568.907 kb on - strand, within EX28DRAFT_0572 at 569.041 kb on + strand, within EX28DRAFT_0572 at 569.120 kb on - strand, within EX28DRAFT_0572 at 569.123 kb on - strand, within EX28DRAFT_0572 at 569.778 kb on - strand at 569.871 kb on + strand at 569.871 kb on + strand at 569.872 kb on - strand at 569.872 kb on - strand at 570.179 kb on - strand, within EX28DRAFT_0573 at 570.397 kb on - strand, within EX28DRAFT_0573 at 570.528 kb on + strand, within EX28DRAFT_0573 at 570.564 kb on + strand, within EX28DRAFT_0573 at 570.568 kb on + strand, within EX28DRAFT_0573 at 570.626 kb on - strand, within EX28DRAFT_0573 at 570.731 kb on - strand, within EX28DRAFT_0573 at 570.845 kb on - strand, within EX28DRAFT_0573 at 570.918 kb on + strand, within EX28DRAFT_0573 at 570.919 kb on - strand, within EX28DRAFT_0573 at 570.996 kb on + strand, within EX28DRAFT_0573 at 571.136 kb on - strand at 571.209 kb on + strand at 571.271 kb on + strand at 571.272 kb on - strand at 571.272 kb on - strand at 571.407 kb on + strand, within EX28DRAFT_0574 at 571.407 kb on + strand, within EX28DRAFT_0574 at 571.408 kb on - strand, within EX28DRAFT_0574 at 571.408 kb on - strand, within EX28DRAFT_0574 at 571.409 kb on + strand, within EX28DRAFT_0574 at 571.410 kb on - strand, within EX28DRAFT_0574 at 571.410 kb on - strand, within EX28DRAFT_0574 at 571.410 kb on - strand, within EX28DRAFT_0574 at 571.536 kb on - strand, within EX28DRAFT_0574 at 571.734 kb on - strand, within EX28DRAFT_0574 at 571.886 kb on + strand, within EX28DRAFT_0574 at 572.124 kb on - strand, within EX28DRAFT_0574 at 572.124 kb on - strand, within EX28DRAFT_0574 at 572.124 kb on - strand, within EX28DRAFT_0574 at 572.127 kb on + strand, within EX28DRAFT_0574 at 572.127 kb on + strand, within EX28DRAFT_0574 at 572.127 kb on + strand, within EX28DRAFT_0574 at 572.151 kb on - strand, within EX28DRAFT_0574 at 572.205 kb on - strand, within EX28DRAFT_0574
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 568,906 + EX28DRAFT_0572 0.56 -0.4 568,907 - EX28DRAFT_0572 0.56 +0.3 568,907 - EX28DRAFT_0572 0.56 +1.1 569,041 + EX28DRAFT_0572 0.62 -0.7 569,120 - EX28DRAFT_0572 0.66 +1.4 569,123 - EX28DRAFT_0572 0.66 +0.3 569,778 - +0.4 569,871 + +0.3 569,871 + -1.1 569,872 - +0.1 569,872 - +0.4 570,179 - EX28DRAFT_0573 0.21 +1.1 570,397 - EX28DRAFT_0573 0.38 -0.4 570,528 + EX28DRAFT_0573 0.48 +0.5 570,564 + EX28DRAFT_0573 0.51 +0.9 570,568 + EX28DRAFT_0573 0.51 +0.6 570,626 - EX28DRAFT_0573 0.55 +0.5 570,731 - EX28DRAFT_0573 0.63 -1.1 570,845 - EX28DRAFT_0573 0.72 -0.4 570,918 + EX28DRAFT_0573 0.77 +1.7 570,919 - EX28DRAFT_0573 0.77 +0.9 570,996 + EX28DRAFT_0573 0.83 +0.2 571,136 - +0.6 571,209 + +0.1 571,271 + +0.2 571,272 - -1.0 571,272 - +0.2 571,407 + EX28DRAFT_0574 0.11 -0.8 571,407 + EX28DRAFT_0574 0.11 +0.2 571,408 - EX28DRAFT_0574 0.11 +0.6 571,408 - EX28DRAFT_0574 0.11 -0.7 571,409 + EX28DRAFT_0574 0.11 +0.2 571,410 - EX28DRAFT_0574 0.11 -0.2 571,410 - EX28DRAFT_0574 0.11 -0.4 571,410 - EX28DRAFT_0574 0.11 -0.8 571,536 - EX28DRAFT_0574 0.18 -0.1 571,734 - EX28DRAFT_0574 0.30 +0.0 571,886 + EX28DRAFT_0574 0.38 -0.1 572,124 - EX28DRAFT_0574 0.52 -0.1 572,124 - EX28DRAFT_0574 0.52 -0.5 572,124 - EX28DRAFT_0574 0.52 +0.9 572,127 + EX28DRAFT_0574 0.52 +0.4 572,127 + EX28DRAFT_0574 0.52 +0.3 572,127 + EX28DRAFT_0574 0.52 +0.6 572,151 - EX28DRAFT_0574 0.54 -0.3 572,205 - EX28DRAFT_0574 0.57 +0.5
Or see this region's nucleotide sequence