Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0535 and EX28DRAFT_0536 overlap by 1 nucleotides EX28DRAFT_0536 and EX28DRAFT_0537 overlap by 1 nucleotides EX28DRAFT_0537 and EX28DRAFT_0538 overlap by 4 nucleotides
EX28DRAFT_0535: EX28DRAFT_0535 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16), at 529,452 to 530,189
_0535
EX28DRAFT_0536: EX28DRAFT_0536 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit, at 530,189 to 530,779
_0536
EX28DRAFT_0537: EX28DRAFT_0537 - imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19), at 530,779 to 531,846
_0537
EX28DRAFT_0538: EX28DRAFT_0538 - histidinol-phosphate aminotransferase, at 531,843 to 532,904
_0538
Position (kb) 530
531
532 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 530.055 kb on + strand, within EX28DRAFT_0535 at 530.055 kb on + strand, within EX28DRAFT_0535 at 530.157 kb on - strand at 530.184 kb on - strand at 530.305 kb on - strand, within EX28DRAFT_0536 at 530.346 kb on + strand, within EX28DRAFT_0536 at 530.649 kb on - strand, within EX28DRAFT_0536 at 530.707 kb on - strand, within EX28DRAFT_0536 at 530.781 kb on - strand at 531.003 kb on + strand, within EX28DRAFT_0537 at 531.005 kb on + strand, within EX28DRAFT_0537 at 531.173 kb on + strand, within EX28DRAFT_0537 at 531.174 kb on - strand, within EX28DRAFT_0537 at 531.174 kb on - strand, within EX28DRAFT_0537 at 531.174 kb on - strand, within EX28DRAFT_0537 at 531.237 kb on + strand, within EX28DRAFT_0537 at 531.387 kb on + strand, within EX28DRAFT_0537 at 531.470 kb on + strand, within EX28DRAFT_0537 at 531.470 kb on + strand, within EX28DRAFT_0537 at 531.470 kb on + strand, within EX28DRAFT_0537 at 531.471 kb on - strand, within EX28DRAFT_0537 at 531.471 kb on - strand, within EX28DRAFT_0537 at 531.471 kb on - strand, within EX28DRAFT_0537 at 531.471 kb on - strand, within EX28DRAFT_0537 at 531.471 kb on - strand, within EX28DRAFT_0537 at 531.471 kb on - strand, within EX28DRAFT_0537 at 531.589 kb on + strand, within EX28DRAFT_0537 at 531.628 kb on - strand, within EX28DRAFT_0537 at 531.703 kb on - strand, within EX28DRAFT_0537 at 531.805 kb on - strand at 531.846 kb on + strand at 531.906 kb on - strand at 531.939 kb on - strand at 531.956 kb on + strand, within EX28DRAFT_0538 at 532.018 kb on + strand, within EX28DRAFT_0538 at 532.019 kb on - strand, within EX28DRAFT_0538 at 532.022 kb on + strand, within EX28DRAFT_0538 at 532.023 kb on - strand, within EX28DRAFT_0538 at 532.082 kb on - strand, within EX28DRAFT_0538 at 532.355 kb on - strand, within EX28DRAFT_0538 at 532.576 kb on + strand, within EX28DRAFT_0538 at 532.589 kb on + strand, within EX28DRAFT_0538 at 532.590 kb on - strand, within EX28DRAFT_0538 at 532.590 kb on - strand, within EX28DRAFT_0538 at 532.600 kb on + strand, within EX28DRAFT_0538 at 532.705 kb on + strand, within EX28DRAFT_0538
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 530,055 + EX28DRAFT_0535 0.82 -2.1 530,055 + EX28DRAFT_0535 0.82 -2.4 530,157 - -0.5 530,184 - +0.1 530,305 - EX28DRAFT_0536 0.20 -2.6 530,346 + EX28DRAFT_0536 0.27 +2.5 530,649 - EX28DRAFT_0536 0.78 -2.9 530,707 - EX28DRAFT_0536 0.88 -2.6 530,781 - -1.0 531,003 + EX28DRAFT_0537 0.21 -1.7 531,005 + EX28DRAFT_0537 0.21 -2.0 531,173 + EX28DRAFT_0537 0.37 -3.5 531,174 - EX28DRAFT_0537 0.37 -1.3 531,174 - EX28DRAFT_0537 0.37 -3.0 531,174 - EX28DRAFT_0537 0.37 -1.6 531,237 + EX28DRAFT_0537 0.43 +0.1 531,387 + EX28DRAFT_0537 0.57 -1.3 531,470 + EX28DRAFT_0537 0.65 -2.6 531,470 + EX28DRAFT_0537 0.65 -1.8 531,470 + EX28DRAFT_0537 0.65 -2.2 531,471 - EX28DRAFT_0537 0.65 +1.9 531,471 - EX28DRAFT_0537 0.65 -3.8 531,471 - EX28DRAFT_0537 0.65 -2.8 531,471 - EX28DRAFT_0537 0.65 -0.2 531,471 - EX28DRAFT_0537 0.65 -3.1 531,471 - EX28DRAFT_0537 0.65 -1.3 531,589 + EX28DRAFT_0537 0.76 -1.0 531,628 - EX28DRAFT_0537 0.79 -2.1 531,703 - EX28DRAFT_0537 0.87 -1.2 531,805 - -2.6 531,846 + -3.1 531,906 - -3.4 531,939 - -1.4 531,956 + EX28DRAFT_0538 0.11 -1.1 532,018 + EX28DRAFT_0538 0.16 -2.3 532,019 - EX28DRAFT_0538 0.17 -4.6 532,022 + EX28DRAFT_0538 0.17 -2.0 532,023 - EX28DRAFT_0538 0.17 -2.0 532,082 - EX28DRAFT_0538 0.23 -0.1 532,355 - EX28DRAFT_0538 0.48 -3.9 532,576 + EX28DRAFT_0538 0.69 -3.3 532,589 + EX28DRAFT_0538 0.70 -0.9 532,590 - EX28DRAFT_0538 0.70 -1.1 532,590 - EX28DRAFT_0538 0.70 -2.8 532,600 + EX28DRAFT_0538 0.71 -3.2 532,705 + EX28DRAFT_0538 0.81 -2.0
Or see this region's nucleotide sequence