Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0469 and EX28DRAFT_0470 are separated by 42 nucleotides EX28DRAFT_0470 and EX28DRAFT_0471 overlap by 27 nucleotides EX28DRAFT_0471 and EX28DRAFT_0472 overlap by 4 nucleotides EX28DRAFT_0472 and EX28DRAFT_0473 overlap by 4 nucleotides
EX28DRAFT_0469: EX28DRAFT_0469 - hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 452,421 to 453,221
_0469
EX28DRAFT_0470: EX28DRAFT_0470 - Transcriptional regulators, at 453,264 to 454,010
_0470
EX28DRAFT_0471: EX28DRAFT_0471 - Sugar kinases, ribokinase family, at 453,984 to 454,937
_0471
EX28DRAFT_0472: EX28DRAFT_0472 - ADP-ribosylglycohydrolase, at 454,934 to 455,938
_0472
EX28DRAFT_0473: EX28DRAFT_0473 - nucleoside transporter, at 455,935 to 457,212
_0473
Position (kb) 453
454
455 Strain fitness (log2 ratio) -1
0
1
2 at 453.008 kb on - strand, within EX28DRAFT_0469 at 453.705 kb on + strand, within EX28DRAFT_0470 at 453.798 kb on + strand, within EX28DRAFT_0470 at 453.799 kb on - strand, within EX28DRAFT_0470 at 453.884 kb on + strand, within EX28DRAFT_0470 at 453.884 kb on + strand, within EX28DRAFT_0470 at 453.885 kb on - strand, within EX28DRAFT_0470 at 453.969 kb on + strand at 453.970 kb on - strand at 453.986 kb on - strand at 453.988 kb on - strand at 454.008 kb on + strand at 454.008 kb on + strand at 454.501 kb on - strand, within EX28DRAFT_0471 at 454.505 kb on - strand, within EX28DRAFT_0471 at 454.692 kb on - strand, within EX28DRAFT_0471 at 454.692 kb on - strand, within EX28DRAFT_0471 at 454.790 kb on + strand, within EX28DRAFT_0471 at 454.937 kb on + strand at 454.938 kb on - strand at 455.220 kb on + strand, within EX28DRAFT_0472 at 455.284 kb on + strand, within EX28DRAFT_0472 at 455.284 kb on + strand, within EX28DRAFT_0472 at 455.674 kb on + strand, within EX28DRAFT_0472 at 455.675 kb on - strand, within EX28DRAFT_0472 at 455.675 kb on - strand, within EX28DRAFT_0472 at 455.794 kb on + strand, within EX28DRAFT_0472 at 455.795 kb on - strand, within EX28DRAFT_0472 at 455.795 kb on - strand, within EX28DRAFT_0472 at 455.814 kb on - strand, within EX28DRAFT_0472
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 453,008 - EX28DRAFT_0469 0.73 +0.2 453,705 + EX28DRAFT_0470 0.59 -0.7 453,798 + EX28DRAFT_0470 0.71 -0.7 453,799 - EX28DRAFT_0470 0.72 +0.1 453,884 + EX28DRAFT_0470 0.83 -0.6 453,884 + EX28DRAFT_0470 0.83 -0.2 453,885 - EX28DRAFT_0470 0.83 -0.1 453,969 + -0.1 453,970 - -0.1 453,986 - -0.5 453,988 - +0.0 454,008 + +0.2 454,008 + -0.1 454,501 - EX28DRAFT_0471 0.54 +1.8 454,505 - EX28DRAFT_0471 0.55 +0.4 454,692 - EX28DRAFT_0471 0.74 +0.3 454,692 - EX28DRAFT_0471 0.74 -0.4 454,790 + EX28DRAFT_0471 0.84 -0.2 454,937 + +0.3 454,938 - +0.1 455,220 + EX28DRAFT_0472 0.28 +1.3 455,284 + EX28DRAFT_0472 0.35 -1.4 455,284 + EX28DRAFT_0472 0.35 -0.6 455,674 + EX28DRAFT_0472 0.74 -0.7 455,675 - EX28DRAFT_0472 0.74 +0.1 455,675 - EX28DRAFT_0472 0.74 -1.4 455,794 + EX28DRAFT_0472 0.86 +0.2 455,795 - EX28DRAFT_0472 0.86 +0.2 455,795 - EX28DRAFT_0472 0.86 -1.1 455,814 - EX28DRAFT_0472 0.88 +0.4
Or see this region's nucleotide sequence